Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 AC092437.1-201ENST00000624794 1048 ntBASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.73■□□□□ 0.59
THUMPD3Q9BV44 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 AL032819.2-201ENST00000624543 2162 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 CNN2P6-201ENST00000439038 900 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 AC007322.4-201ENST00000509611 723 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 AL031963.3-201ENST00000606441 850 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 AC016405.3-201ENST00000607710 860 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 KRT8P20-201ENST00000423953 1409 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 AP001271.2-201ENST00000624018 1556 ntBASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
THUMPD3Q9BV44 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 AC004911.1-201ENST00000416316 871 ntBASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 AL162412.1-201ENST00000567129 965 ntBASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD3Q9BV44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.71■□□□□ 0.58
THUMPD3Q9BV44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD3Q9BV44 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms