Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
PRAC1Q96KF2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SIRPAP1-201ENST00000448467 1770 ntBASIC9.6□□□□□ -0.87
PRAC1Q96KF2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 PCDHB17P-201ENST00000539533 2393 ntBASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CICP14-201ENST00000629111 2732 ntBASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC9.6□□□□□ -0.87
PRAC1Q96KF2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PRAC1Q96KF2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms