Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC39Q96DD0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 RNF165-205ENST00000588679 2904 ntBASIC19.81■□□□□ 0.76
LRRC39Q96DD0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 TFP1-202ENST00000475455 1573 ntBASIC19.81■□□□□ 0.76
LRRC39Q96DD0 AC004408.2-201ENST00000623613 2777 ntBASIC19.81■□□□□ 0.76
LRRC39Q96DD0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC39Q96DD0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC39Q96DD0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 AC004911.1-201ENST00000416316 871 ntBASIC19.79■□□□□ 0.76
LRRC39Q96DD0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 AC022517.1-201ENST00000592429 346 ntBASIC19.79■□□□□ 0.76
LRRC39Q96DD0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC39Q96DD0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 MKRN4P-201ENST00000444706 1521 ntBASIC19.78■□□□□ 0.76
LRRC39Q96DD0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LRRC39Q96DD0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms