Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
CCDC25Q86WR0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 KRT18P61-201ENST00000585825 1298 ntBASIC20.23■□□□□ 0.83
CCDC25Q86WR0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC25Q86WR0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 LINC01465-201ENST00000408887 1940 ntBASIC20.22■□□□□ 0.83
CCDC25Q86WR0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 AL031963.3-201ENST00000606441 850 ntBASIC20.22■□□□□ 0.83
CCDC25Q86WR0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC25Q86WR0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 AP001271.2-201ENST00000624018 1556 ntBASIC20.21■□□□□ 0.83
CCDC25Q86WR0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 TERF1P5-201ENST00000477545 1207 ntBASIC20.21■□□□□ 0.83
CCDC25Q86WR0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 AC016405.3-201ENST00000607710 860 ntBASIC20.21■□□□□ 0.83
CCDC25Q86WR0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC25Q86WR0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC25Q86WR0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms