Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 AIRN-201ENST00000601203 4374 ntBASIC14.84□□□□□ -0.03
HIST1H2BDP58876 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H2BDP58876 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
HIST1H2BDP58876 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 AC093525.10-201ENST00000625130 1569 ntBASIC14.83□□□□□ -0.04
HIST1H2BDP58876 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HIST1H2BDP58876 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HIST1H2BDP58876 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST1H2BDP58876 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.81□□□□□ -0.04
HIST1H2BDP58876 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HIST1H2BDP58876 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms