Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.74■□□□□ 0.43
SSX4O60224 AL591742.1-201ENST00000604433 565 ntBASIC17.74■□□□□ 0.43
SSX4O60224 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.74■□□□□ 0.43
SSX4O60224 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX4O60224 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
SSX4O60224 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.74■□□□□ 0.43
SSX4O60224 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
SSX4O60224 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSX4O60224 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 RBM17P2-201ENST00000616397 1405 ntBASIC17.73■□□□□ 0.43
SSX4O60224 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SSX4O60224 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.73■□□□□ 0.43
SSX4O60224 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.73■□□□□ 0.43
SSX4O60224 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 AC061975.6-201ENST00000579045 1553 ntBASIC17.73■□□□□ 0.43
SSX4O60224 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
SSX4O60224 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SSX4O60224 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSX4O60224 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSX4O60224 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SSX4O60224 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SSX4O60224 AC097658.1-201ENST00000475555 843 ntBASIC17.72■□□□□ 0.43
SSX4O60224 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 AC008687.6-201ENST00000596318 630 ntBASIC17.72■□□□□ 0.43
SSX4O60224 AC018470.1-201ENST00000624790 3129 ntBASIC17.72■□□□□ 0.43
SSX4O60224 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSX4O60224 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSX4O60224 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.72■□□□□ 0.43
SSX4O60224 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSX4O60224 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SSX4O60224 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSX4O60224 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SSX4O60224 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SSX4O60224 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SSX4O60224 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SSX4O60224 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms