Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 AC008764.6-201ENST00000595909 2069 ntBASIC13.87□□□□□ -0.19
LINC01546A6NGU7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 AL162741.1-201ENST00000565563 1558 ntBASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01546A6NGU7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 PHGDH-210ENST00000641115 1638 ntBASIC13.86□□□□□ -0.19
LINC01546A6NGU7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 TPRG1LP1-201ENST00000598702 760 ntBASIC13.86□□□□□ -0.19
LINC01546A6NGU7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 KRT8P20-201ENST00000423953 1409 ntBASIC13.86□□□□□ -0.19
LINC01546A6NGU7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01546A6NGU7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms