Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 MIR4767-201ENST00000582827 78 ntBASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 FZD10-202ENST00000539839 3282 ntBASIC16.2■□□□□ 0.18
LSM5Q9Y4Y9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 AC120498.10-201ENST00000621827 505 ntBASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 KRT16P2-201ENST00000414673 1423 ntBASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM5Q9Y4Y9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 AC104581.1-202ENST00000635932 2618 ntBASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LSM5Q9Y4Y9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 AC009237.14-201ENST00000609975 1594 ntBASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM5Q9Y4Y9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms