Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN3Q9H347 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 AC116562.4-201ENST00000641316 2276 ntBASIC18.21■□□□□ 0.51
UBQLN3Q9H347 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 BX119927.1-201ENST00000636596 1552 ntBASIC18.21■□□□□ 0.51
UBQLN3Q9H347 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN3Q9H347 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UBQLN3Q9H347 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 RPS2P52-201ENST00000469610 820 ntBASIC18.2■□□□□ 0.5
UBQLN3Q9H347 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 RN7SL471P-201ENST00000580476 299 ntBASIC18.2■□□□□ 0.5
UBQLN3Q9H347 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 TMEM179-206ENST00000616017 1645 ntBASIC18.2■□□□□ 0.5
UBQLN3Q9H347 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN3Q9H347 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 RNF165-205ENST00000588679 2904 ntBASIC18.19■□□□□ 0.5
UBQLN3Q9H347 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN3Q9H347 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms