Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHACTR1Q9C0D0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.94■□□□□ 0.78
PHACTR1Q9C0D0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHACTR1Q9C0D0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 AC137761.2-201ENST00000561729 223 ntBASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 AC145350.3-201ENST00000569033 163 ntBASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.93■□□□□ 0.78
PHACTR1Q9C0D0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 AC116351.2-201ENST00000606540 1585 ntBASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.92■□□□□ 0.78
PHACTR1Q9C0D0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 AC026471.1-201ENST00000564629 3026 ntBASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 OR10C1-204ENST00000622521 1039 ntBASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHACTR1Q9C0D0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 AC026271.2-201ENST00000428091 497 ntBASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 AC008694.1-202ENST00000636953 945 ntBASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHACTR1Q9C0D0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHACTR1Q9C0D0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PHACTR1Q9C0D0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms