Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-2Q9C056 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-2Q9C056 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 AC006455.2-201ENST00000429931 906 ntBASIC15.9■□□□□ 0.14
NKX6-2Q9C056 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX6-2Q9C056 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 AP005435.1-201ENST00000529293 1178 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MIR3181-201ENST00000578512 73 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MIR6724-1-201ENST00000616420 92 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MIR6724-2-201ENST00000616483 92 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MIR6724-4-201ENST00000617390 92 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 MIR6724-3-201ENST00000622482 92 ntBASIC15.89■□□□□ 0.13
NKX6-2Q9C056 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX6-2Q9C056 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.88■□□□□ 0.13
NKX6-2Q9C056 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX6-2Q9C056 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms