Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 HLA-A-209ENST00000638375 975 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 MIR7706-201ENST00000613747 67 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 LINC00265-3P-201ENST00000447588 903 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 AP005901.3-202ENST00000581653 237 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 AL353801.3-201ENST00000609898 542 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 LINC00167-201ENST00000530583 1419 ntBASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.09□□□□□ -0.63
HMCN2Q8NDA2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AL162741.1-201ENST00000565563 1558 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 KRT18P67-201ENST00000432816 1264 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AP003041.3-201ENST00000527151 707 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AP001005.1-201ENST00000571755 1248 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AC134684.3-201ENST00000641758 218 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 AL121672.3-201ENST00000608644 468 ntBASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HMCN2Q8NDA2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 HLA-G-202ENST00000376815 851 ntBASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AL031284.1-201ENST00000419297 478 ntBASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AC148477.8-201ENST00000624298 468 ntBASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HMCN2Q8NDA2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms