Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP3S2P59780 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3S2P59780 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
AP3S2P59780 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP3S2P59780 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP3S2P59780 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
AP3S2P59780 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
AP3S2P59780 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AP3S2P59780 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3S2P59780 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3S2P59780 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3S2P59780 AC120498.10-201ENST00000621827 505 ntBASIC16.89■□□□□ 0.29
AP3S2P59780 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3S2P59780 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
AP3S2P59780 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3S2P59780 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3S2P59780 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3S2P59780 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
AP3S2P59780 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.88■□□□□ 0.29
AP3S2P59780 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
AP3S2P59780 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
AP3S2P59780 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.88■□□□□ 0.29
AP3S2P59780 FAM21FP-204ENST00000608637 956 ntBASIC16.88■□□□□ 0.29
AP3S2P59780 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.88■□□□□ 0.29
AP3S2P59780 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
AP3S2P59780 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP3S2P59780 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S2P59780 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AP3S2P59780 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S2P59780 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S2P59780 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 BX842568.3-201ENST00000418104 571 ntBASIC16.87■□□□□ 0.29
AP3S2P59780 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AP3S2P59780 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S2P59780 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S2P59780 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S2P59780 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S2P59780 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S2P59780 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S2P59780 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms