Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.59■□□□□ 0.57
NR1H2P55055 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.59■□□□□ 0.57
NR1H2P55055 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.59■□□□□ 0.57
NR1H2P55055 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.59■□□□□ 0.57
NR1H2P55055 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.59■□□□□ 0.57
NR1H2P55055 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H2P55055 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H2P55055 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H2P55055 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H2P55055 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.57
NR1H2P55055 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR1H2P55055 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.58■□□□□ 0.56
NR1H2P55055 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.58■□□□□ 0.56
NR1H2P55055 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.58■□□□□ 0.56
NR1H2P55055 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NR1H2P55055 AP000997.3-201ENST00000623333 2250 ntBASIC18.58■□□□□ 0.56
NR1H2P55055 AL390961.4-201ENST00000623958 2535 ntBASIC18.58■□□□□ 0.56
NR1H2P55055 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR1H2P55055 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.57■□□□□ 0.56
NR1H2P55055 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NR1H2P55055 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NR1H2P55055 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NR1H2P55055 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.57■□□□□ 0.56
NR1H2P55055 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.57■□□□□ 0.56
NR1H2P55055 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR1H2P55055 AC011484.1-201ENST00000377652 1995 ntBASIC18.57■□□□□ 0.56
NR1H2P55055 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 LINC01465-201ENST00000408887 1940 ntBASIC18.57■□□□□ 0.56
NR1H2P55055 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NR1H2P55055 AC055733.4-201ENST00000638462 1354 ntBASIC18.56■□□□□ 0.56
NR1H2P55055 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 FZD10-202ENST00000539839 3282 ntBASIC18.56■□□□□ 0.56
NR1H2P55055 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H2P55055 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H2P55055 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H2P55055 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H2P55055 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NR1H2P55055 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.56■□□□□ 0.56
NR1H2P55055 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
NR1H2P55055 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NR1H2P55055 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.55■□□□□ 0.56
NR1H2P55055 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.55■□□□□ 0.56
NR1H2P55055 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.55■□□□□ 0.56
NR1H2P55055 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NR1H2P55055 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.54■□□□□ 0.56
NR1H2P55055 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms