Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLCNKAP51800 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCNKAP51800 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCNKAP51800 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCNKAP51800 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLCNKAP51800 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.3■□□□□ 0.68
CLCNKAP51800 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLCNKAP51800 AL353708.3-201ENST00000610272 989 ntBASIC19.3■□□□□ 0.68
CLCNKAP51800 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCNKAP51800 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCNKAP51800 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLCNKAP51800 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCNKAP51800 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCNKAP51800 HTR7P1-201ENST00000538670 1336 ntBASIC19.29■□□□□ 0.68
CLCNKAP51800 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLCNKAP51800 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 AC112907.3-201ENST00000577781 2400 ntBASIC19.29■□□□□ 0.68
CLCNKAP51800 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLCNKAP51800 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.29■□□□□ 0.68
CLCNKAP51800 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLCNKAP51800 MIR4497-201ENST00000583208 89 ntBASIC19.29■□□□□ 0.68
CLCNKAP51800 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 AL049637.2-201ENST00000641778 930 ntBASIC19.29■□□□□ 0.68
CLCNKAP51800 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCNKAP51800 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
CLCNKAP51800 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCNKAP51800 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCNKAP51800 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.28■□□□□ 0.68
CLCNKAP51800 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.28■□□□□ 0.68
CLCNKAP51800 AP001271.2-201ENST00000624018 1556 ntBASIC19.28■□□□□ 0.68
CLCNKAP51800 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CLCNKAP51800 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCNKAP51800 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCNKAP51800 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCNKAP51800 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.28■□□□□ 0.68
CLCNKAP51800 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.28■□□□□ 0.68
CLCNKAP51800 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.28■□□□□ 0.68
CLCNKAP51800 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCNKAP51800 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCNKAP51800 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCNKAP51800 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CLCNKAP51800 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCNKAP51800 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCNKAP51800 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLCNKAP51800 KRT18P16-201ENST00000510337 1294 ntBASIC19.27■□□□□ 0.68
CLCNKAP51800 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCNKAP51800 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCNKAP51800 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCNKAP51800 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCNKAP51800 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCNKAP51800 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCNKAP51800 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms