Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CAP1-207ENST00000414281 772 ntTSL 410.82□□□□□ -0.685e-7■■■■□ 22.6
RPS3P23396 CAP1-212ENST00000424977 702 ntTSL 55.91□□□□□ -1.465e-7■■■■□ 22.6
RPS3P23396 MRPL19-205ENST00000476622 744 ntTSL 213.73□□□□□ -0.218e-7■■■■□ 22.6
RPS3P23396 PPP4C-208ENST00000564966 1122 ntTSL 224.34■■□□□ 1.494e-8■■■■□ 22.6
RPS3P23396 PPP4C-213ENST00000568810 1080 ntTSL 224■■□□□ 1.434e-8■■■■□ 22.6
RPS3P23396 PPP4C-212ENST00000567828 742 ntTSL 321.86■■□□□ 1.094e-8■■■■□ 22.6
RPS3P23396 PRDX6-203ENST00000470017 859 ntTSL 27.58□□□□□ -1.23e-9■■■■□ 22.6
RPS3P23396 LDHA-211ENST00000494573 1154 ntTSL 211.15□□□□□ -0.624e-15■■■■□ 22.6
RPS3P23396 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.68■■■□□ 2.023e-26■■■■□ 22.6
RPS3P23396 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.42■■□□□ 1.823e-26■■■■□ 22.6
RPS3P23396 EBPL-206ENST00000473576 810 ntTSL 224.95■■□□□ 1.583e-26■■■■□ 22.6
RPS3P23396 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.583e-26■■■■□ 22.6
RPS3P23396 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.59■■□□□ 1.213e-26■■■■□ 22.6
RPS3P23396 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.23■□□□□ 0.993e-26■■■■□ 22.6
RPS3P23396 EBPL-207ENST00000495963 1026 ntTSL 1 (best)21.09■□□□□ 0.973e-26■■■■□ 22.6
RPS3P23396 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.342e-8■■■■□ 22.6
RPS3P23396 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.37□□□□□ -0.112e-8■■■■□ 22.6
RPS3P23396 RCC1-205ENST00000411533 1169 ntTSL 514.12□□□□□ -0.152e-8■■■■□ 22.6
RPS3P23396 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.672e-8■■■■□ 22.6
RPS3P23396 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.812e-8■■■■□ 22.6
RPS3P23396 TAPBP-240ENST00000480730 2202 ntTSL 1 (best)18.06■□□□□ 0.488e-11■■■■□ 22.6
RPS3P23396 TAPBP-235ENST00000437116 1239 ntTSL 1 (best)17.57■□□□□ 0.48e-11■■■■□ 22.6
RPS3P23396 GLG1-209ENST00000565260 461 ntTSL 526.01■■□□□ 1.755e-23■■■■□ 22.6
RPS3P23396 C2-212ENST00000482060 2335 ntTSL 212.64□□□□□ -0.392e-7■■■■□ 22.6
RPS3P23396 C2-211ENST00000469372 1906 ntTSL 2 BASIC12.21□□□□□ -0.462e-7■■■■□ 22.6
RPS3P23396 ADH5-212ENST00000512991 880 ntTSL 510.49□□□□□ -0.733e-7■■■■□ 22.6
RPS3P23396 ACTL6A-212ENST00000490364 459 ntTSL 318.6■□□□□ 0.574e-7■■■■□ 22.6
RPS3P23396 ACTL6A-207ENST00000468767 622 ntTSL 314.83□□□□□ -0.044e-7■■■■□ 22.6
RPS3P23396 ACTL6A-213ENST00000491202 597 ntTSL 214.83□□□□□ -0.044e-7■■■■□ 22.6
RPS3P23396 ACTL6A-214ENST00000494843 591 ntTSL 26.71□□□□□ -1.344e-7■■■■□ 22.6
RPS3P23396 SCARB1-206ENST00000539320 720 ntTSL 221.41■■□□□ 1.024e-20■■■■□ 22.5
RPS3P23396 SCARB1-210ENST00000545493 581 ntTSL 220.35■□□□□ 0.854e-20■■■■□ 22.5
RPS3P23396 SCARB1-207ENST00000541661 476 ntTSL 512.43□□□□□ -0.424e-20■■■■□ 22.5
RPS3P23396 QPCTL-203ENST00000591606 561 ntTSL 320.51■□□□□ 0.871e-6■■■■□ 22.5
RPS3P23396 DLD-208ENST00000453354 537 ntTSL 44.95□□□□□ -1.622e-6■■■■□ 22.5
RPS3P23396 DLD-206ENST00000450038 682 ntTSL 54.95□□□□□ -1.622e-6■■■■□ 22.5
RPS3P23396 DLD-209ENST00000460577 600 ntTSL 24.37□□□□□ -1.712e-6■■■■□ 22.5
RPS3P23396 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.58□□□□□ -22e-6■■■■□ 22.5
RPS3P23396 P4HA2-216ENST00000467587 456 ntTSL 26.48□□□□□ -1.373e-7■■■■□ 22.5
RPS3P23396 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)10.29□□□□□ -0.761e-6■■■■□ 22.5
RPS3P23396 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.011e-7■■■■□ 22.5
RPS3P23396 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC12.17□□□□□ -0.461e-7■■■■□ 22.5
RPS3P23396 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.7□□□□□ -1.021e-7■■■■□ 22.5
RPS3P23396 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.09□□□□□ -1.271e-7■■■■□ 22.5
RPS3P23396 ALDOA-218ENST00000566146 365 ntTSL 1 (best)8.82□□□□□ -16e-79■■■■□ 22.5
RPS3P23396 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.099e-7■■■■□ 22.5
RPS3P23396 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.99e-7■■■■□ 22.5
RPS3P23396 EIF3I-204ENST00000474371 643 ntTSL 37.05□□□□□ -1.282e-8■■■■□ 22.5
RPS3P23396 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.051e-14■■■■□ 22.5
RPS3P23396 HEXB-209ENST00000513079 1684 ntTSL 221.44■■□□□ 1.021e-14■■■■□ 22.5
RPS3P23396 HEXB-213ENST00000515528 876 ntTSL 220.64■□□□□ 0.891e-14■■■■□ 22.5
RPS3P23396 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.16■□□□□ 0.51e-14■■■■□ 22.5
RPS3P23396 PSMA1-205ENST00000527632 693 ntTSL 23.5□□□□□ -1.853e-9■■■■□ 22.5
RPS3P23396 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.71■□□□□ 0.112e-25■■■■□ 22.5
RPS3P23396 NCLN-202ENST00000586904 836 ntTSL 516.57■□□□□ 0.249e-8■■■■□ 22.5
RPS3P23396 C2-202ENST00000383177 1847 ntTSL 515□□□□□ -0.012e-7■■■■□ 22.5
RPS3P23396 RRM2-206ENST00000474701 1060 ntTSL 213.68□□□□□ -0.224e-8■■■■□ 22.5
RPS3P23396 GDI2-207ENST00000479928 2499 ntTSL 28.72□□□□□ -1.011e-6■■■■□ 22.5
RPS3P23396 GDI2-205ENST00000447751 834 ntTSL 32.94□□□□□ -1.941e-6■■■■□ 22.5
RPS3P23396 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.462e-6■■■■□ 22.5
RPS3P23396 TDP2-204ENST00000478507 573 ntTSL 512.13□□□□□ -0.472e-6■■■■□ 22.5
RPS3P23396 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.591e-7■■■■□ 22.5
RPS3P23396 AC008982.1-202ENST00000602021 342 ntTSL 57.63□□□□□ -1.191e-7■■■■□ 22.5
RPS3P23396 CS-231ENST00000552222 555 ntTSL 413.32□□□□□ -0.281e-6■■■■□ 22.5
RPS3P23396 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.21e-7■■■■□ 22.5
RPS3P23396 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.831e-7■■■■□ 22.5
RPS3P23396 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.111e-7■■■■□ 22.5
RPS3P23396 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.221e-6■■■■□ 22.5
RPS3P23396 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.93■□□□□ 0.141e-6■■■■□ 22.5
RPS3P23396 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.99□□□□□ -0.011e-6■■■■□ 22.5
RPS3P23396 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.813e-24■■■■□ 22.5
RPS3P23396 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.593e-24■■■■□ 22.5
RPS3P23396 RBP4-203ENST00000371469 814 ntTSL 5 BASIC12.64□□□□□ -0.393e-24■■■■□ 22.5
RPS3P23396 RBP4-204ENST00000629763 838 ntTSL 5 BASIC10.24□□□□□ -0.773e-24■■■■□ 22.5
RPS3P23396 BUD23-206ENST00000430270 1260 ntTSL 518.37■□□□□ 0.531e-6■■■■□ 22.4
RPS3P23396 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.521e-6■■■■□ 22.4
RPS3P23396 BUD23-213ENST00000463307 1815 ntTSL 1 (best)14.45□□□□□ -0.11e-6■■■■□ 22.4
RPS3P23396 BUD23-209ENST00000436944 2496 ntTSL 214.12□□□□□ -0.151e-6■■■■□ 22.4
RPS3P23396 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.18□□□□□ -0.31e-6■■■■□ 22.4
RPS3P23396 SLC2A1-208ENST00000630287 2398 ntTSL 515.09■□□□□ 0.012e-18■■■■□ 22.4
RPS3P23396 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.522e-18■■■■□ 22.4
RPS3P23396 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.73■□□□□ 0.116e-9■■■■□ 22.4
RPS3P23396 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.523e-7■■■■□ 22.4
RPS3P23396 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.283e-7■■■■□ 22.4
RPS3P23396 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.545e-7■■■■□ 22.4
RPS3P23396 CTSH-202ENST00000525807 1122 ntTSL 518.29■□□□□ 0.525e-7■■■■□ 22.4
RPS3P23396 CTSH-213ENST00000533777 2101 ntTSL 1 (best)17.24■□□□□ 0.355e-7■■■■□ 22.4
RPS3P23396 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.967e-8■■■■□ 22.4
RPS3P23396 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.297e-8■■■■□ 22.4
RPS3P23396 APRT-203ENST00000562464 515 ntTSL 318.27■□□□□ 0.523e-8■■■■□ 22.4
RPS3P23396 APRT-211ENST00000569616 788 ntTSL 516.36■□□□□ 0.212e-8■■■■□ 22.4
RPS3P23396 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.73□□□□□ -0.052e-8■■■■□ 22.4
RPS3P23396 APRT-207ENST00000567391 667 ntTSL 313.75□□□□□ -0.212e-8■■■■□ 22.4
RPS3P23396 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-8■■■■□ 22.4
RPS3P23396 APRT-209ENST00000568319 542 ntTSL 312.45□□□□□ -0.422e-8■■■■□ 22.4
RPS3P23396 APRT-202ENST00000426324 664 ntTSL 2 BASIC12.04□□□□□ -0.482e-8■■■■□ 22.4
RPS3P23396 APRT-208ENST00000567713 470 ntTSL 511.51□□□□□ -0.572e-8■■■■□ 22.4
RPS3P23396 POR-221ENST00000487247 853 ntTSL 213.71□□□□□ -0.213e-22■■■■□ 22.4
RPS3P23396 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.193e-7■■■■□ 22.4
RPS3P23396 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.073e-7■■■■□ 22.4
Retrieved 100 of 24,271 protein–RNA pairs in 198.6 ms