Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRAFP15056 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.19■□□□□ 0.82
BRAFP15056 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
BRAFP15056 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
BRAFP15056 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.19■□□□□ 0.82
BRAFP15056 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRAFP15056 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
BRAFP15056 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.18■□□□□ 0.82
BRAFP15056 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRAFP15056 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.18■□□□□ 0.82
BRAFP15056 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.18■□□□□ 0.82
BRAFP15056 AC007322.3-201ENST00000426526 701 ntBASIC20.18■□□□□ 0.82
BRAFP15056 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.18■□□□□ 0.82
BRAFP15056 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.18■□□□□ 0.82
BRAFP15056 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
BRAFP15056 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.18■□□□□ 0.82
BRAFP15056 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRAFP15056 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRAFP15056 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRAFP15056 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRAFP15056 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BRAFP15056 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.17■□□□□ 0.82
BRAFP15056 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.17■□□□□ 0.82
BRAFP15056 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.17■□□□□ 0.82
BRAFP15056 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.17■□□□□ 0.82
BRAFP15056 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BRAFP15056 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 KRT8P36-201ENST00000489121 1440 ntBASIC20.17■□□□□ 0.82
BRAFP15056 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.17■□□□□ 0.82
BRAFP15056 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
BRAFP15056 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRAFP15056 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.16■□□□□ 0.82
BRAFP15056 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
BRAFP15056 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BRAFP15056 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BRAFP15056 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.16■□□□□ 0.82
BRAFP15056 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.16■□□□□ 0.82
BRAFP15056 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.16■□□□□ 0.82
BRAFP15056 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.16■□□□□ 0.82
BRAFP15056 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.16■□□□□ 0.82
BRAFP15056 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.16■□□□□ 0.82
BRAFP15056 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BRAFP15056 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRAFP15056 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BRAFP15056 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BRAFP15056 BX276092.2-201ENST00000417668 665 ntBASIC20.15■□□□□ 0.82
BRAFP15056 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.15■□□□□ 0.82
BRAFP15056 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
BRAFP15056 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.15■□□□□ 0.82
BRAFP15056 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
BRAFP15056 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.15■□□□□ 0.82
BRAFP15056 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
BRAFP15056 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRAFP15056 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
BRAFP15056 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.14■□□□□ 0.82
BRAFP15056 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.14■□□□□ 0.81
BRAFP15056 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
BRAFP15056 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
BRAFP15056 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRAFP15056 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms