Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 KRT18P11-201ENST00000435214 1283 ntBASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV5-5A0A0J9YX44 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC068338.2-201ENST00000563278 1430 ntBASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 NTF6G-201ENST00000591094 616 ntBASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-5A0A0J9YX44 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 CNN2P6-201ENST00000439038 900 ntBASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-5A0A0J9YX44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 AC141586.3-201ENST00000562166 1838 ntBASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-5A0A0J9YX44 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms