Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 HSD17B1P1-201ENST00000590052 955 ntBASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 AL161938.1-201ENST00000569833 2180 ntBASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 Z98044.1-201ENST00000632503 1764 ntBASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV12-1A0A0B4J245 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 AC068880.1-201ENST00000507289 2297 ntBASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 SRD5A1P1-201ENST00000442297 786 ntBASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 AL031598.1-201ENST00000561511 1773 ntBASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV12-1A0A0B4J245 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 AC093525.10-201ENST00000625130 1569 ntBASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 AC133561.4-201ENST00000566112 224 ntBASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms