Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
APOA1P02647 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
APOA1P02647 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
APOA1P02647 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
APOA1P02647 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
APOA1P02647 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APOA1P02647 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.56■□□□□ 0.4
APOA1P02647 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.56■□□□□ 0.4
APOA1P02647 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.56■□□□□ 0.4
APOA1P02647 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.56■□□□□ 0.4
APOA1P02647 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
APOA1P02647 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.56■□□□□ 0.4
APOA1P02647 AL138724.1-201ENST00000606771 1088 ntBASIC17.56■□□□□ 0.4
APOA1P02647 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.56■□□□□ 0.4
APOA1P02647 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.56■□□□□ 0.4
APOA1P02647 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOA1P02647 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
APOA1P02647 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.55■□□□□ 0.4
APOA1P02647 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
APOA1P02647 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.55■□□□□ 0.4
APOA1P02647 SLC47A1P1-202ENST00000449666 945 ntBASIC17.55■□□□□ 0.4
APOA1P02647 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
APOA1P02647 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOA1P02647 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
APOA1P02647 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
APOA1P02647 TREX1-205ENST00000625293 1783 ntBASIC17.54■□□□□ 0.4
APOA1P02647 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
APOA1P02647 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
APOA1P02647 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 SRD5A1P1-201ENST00000442297 786 ntBASIC17.54■□□□□ 0.4
APOA1P02647 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.54■□□□□ 0.4
APOA1P02647 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.54■□□□□ 0.4
APOA1P02647 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
APOA1P02647 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
APOA1P02647 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOA1P02647 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOA1P02647 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOA1P02647 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
APOA1P02647 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOA1P02647 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOA1P02647 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOA1P02647 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.53■□□□□ 0.4
APOA1P02647 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms