Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LTAP01374 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.84□□□□□ -0.03
LTAP01374 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LTAP01374 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LTAP01374 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.84□□□□□ -0.03
LTAP01374 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.84□□□□□ -0.03
LTAP01374 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.84□□□□□ -0.03
LTAP01374 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.84□□□□□ -0.03
LTAP01374 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.84□□□□□ -0.03
LTAP01374 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.84□□□□□ -0.03
LTAP01374 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LTAP01374 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.84□□□□□ -0.03
LTAP01374 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LTAP01374 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTAP01374 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LTAP01374 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
LTAP01374 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.83□□□□□ -0.03
LTAP01374 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTAP01374 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTAP01374 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTAP01374 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LTAP01374 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.83□□□□□ -0.04
LTAP01374 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.83□□□□□ -0.04
LTAP01374 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.83□□□□□ -0.04
LTAP01374 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.83□□□□□ -0.04
LTAP01374 AL031963.3-201ENST00000606441 850 ntBASIC14.83□□□□□ -0.04
LTAP01374 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.83□□□□□ -0.04
LTAP01374 MIR6084-201ENST00000622012 110 ntBASIC14.83□□□□□ -0.04
LTAP01374 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LTAP01374 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
LTAP01374 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.83□□□□□ -0.04
LTAP01374 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.83□□□□□ -0.04
LTAP01374 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTAP01374 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.82□□□□□ -0.04
LTAP01374 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.82□□□□□ -0.04
LTAP01374 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.82□□□□□ -0.04
LTAP01374 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 AL161938.1-201ENST00000569833 2180 ntBASIC14.82□□□□□ -0.04
LTAP01374 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTAP01374 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.82□□□□□ -0.04
LTAP01374 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTAP01374 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms