Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.04■□□□□ 0.32
DHFRP00374 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DHFRP00374 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DHFRP00374 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
DHFRP00374 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.04■□□□□ 0.32
DHFRP00374 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DHFRP00374 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DHFRP00374 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
DHFRP00374 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DHFRP00374 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DHFRP00374 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.03■□□□□ 0.32
DHFRP00374 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DHFRP00374 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 UNC93B3-201ENST00000308076 687 ntBASIC17.02■□□□□ 0.32
DHFRP00374 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.02■□□□□ 0.32
DHFRP00374 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DHFRP00374 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.02■□□□□ 0.32
DHFRP00374 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
DHFRP00374 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.02■□□□□ 0.31
DHFRP00374 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 CROCCP3-202ENST00000420820 1947 ntBASIC17.02■□□□□ 0.31
DHFRP00374 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DHFRP00374 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DHFRP00374 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.01■□□□□ 0.31
DHFRP00374 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.01■□□□□ 0.31
DHFRP00374 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
DHFRP00374 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DHFRP00374 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 AC104581.1-202ENST00000635932 2618 ntBASIC17.01■□□□□ 0.31
DHFRP00374 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DHFRP00374 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
DHFRP00374 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DHFRP00374 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms