Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L2-201ENST00000561772 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.1■□□□□ 0.17
SCAF4O95104 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L6-201ENST00000626483 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L1-201ENST00000627662 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L8-201ENST00000629013 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L3-201ENST00000630187 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L7-201ENST00000630678 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 DUX4L5-201ENST00000630834 1275 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 RARRES2P11-201ENST00000635158 484 ntBASIC16.1■□□□□ 0.17
SCAF4O95104 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.1■□□□□ 0.17
SCAF4O95104 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SCAF4O95104 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCAF4O95104 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SCAF4O95104 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.1■□□□□ 0.17
SCAF4O95104 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.1■□□□□ 0.17
SCAF4O95104 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.1■□□□□ 0.17
SCAF4O95104 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.1■□□□□ 0.17
SCAF4O95104 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.09■□□□□ 0.17
SCAF4O95104 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 FZD10-202ENST00000539839 3282 ntBASIC16.09■□□□□ 0.17
SCAF4O95104 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.09■□□□□ 0.17
SCAF4O95104 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.09■□□□□ 0.17
SCAF4O95104 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.09■□□□□ 0.17
SCAF4O95104 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.09■□□□□ 0.17
SCAF4O95104 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.09■□□□□ 0.17
SCAF4O95104 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.09■□□□□ 0.17
SCAF4O95104 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
SCAF4O95104 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SCAF4O95104 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.09■□□□□ 0.17
SCAF4O95104 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SCAF4O95104 BX119927.1-201ENST00000636596 1552 ntBASIC16.09■□□□□ 0.17
SCAF4O95104 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCAF4O95104 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SCAF4O95104 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SCAF4O95104 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SCAF4O95104 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.08■□□□□ 0.17
SCAF4O95104 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SCAF4O95104 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.08■□□□□ 0.17
SCAF4O95104 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SCAF4O95104 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.17
SCAF4O95104 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SCAF4O95104 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SCAF4O95104 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.08■□□□□ 0.16
SCAF4O95104 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCAF4O95104 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCAF4O95104 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCAF4O95104 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.08■□□□□ 0.16
SCAF4O95104 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.08■□□□□ 0.16
SCAF4O95104 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCAF4O95104 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SCAF4O95104 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.08■□□□□ 0.16
SCAF4O95104 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.08■□□□□ 0.16
SCAF4O95104 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.08■□□□□ 0.16
SCAF4O95104 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCAF4O95104 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCAF4O95104 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms