Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CASQ2O14958 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASQ2O14958 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 AC009237.14-201ENST00000609975 1594 ntBASIC18.73■□□□□ 0.59
CASQ2O14958 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
CASQ2O14958 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.73■□□□□ 0.59
CASQ2O14958 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CASQ2O14958 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CASQ2O14958 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
CASQ2O14958 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASQ2O14958 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.73■□□□□ 0.59
CASQ2O14958 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASQ2O14958 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.73■□□□□ 0.59
CASQ2O14958 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.72■□□□□ 0.59
CASQ2O14958 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CASQ2O14958 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CASQ2O14958 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CASQ2O14958 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
CASQ2O14958 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.72■□□□□ 0.59
CASQ2O14958 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.72■□□□□ 0.59
CASQ2O14958 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CASQ2O14958 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASQ2O14958 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CASQ2O14958 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CASQ2O14958 MIR6724-1-201ENST00000616420 92 ntBASIC18.71■□□□□ 0.59
CASQ2O14958 MIR6724-2-201ENST00000616483 92 ntBASIC18.71■□□□□ 0.59
CASQ2O14958 MIR6724-4-201ENST00000617390 92 ntBASIC18.71■□□□□ 0.59
CASQ2O14958 MIR6724-3-201ENST00000622482 92 ntBASIC18.71■□□□□ 0.59
CASQ2O14958 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CASQ2O14958 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CASQ2O14958 AL133373.2-201ENST00000623187 2828 ntBASIC18.71■□□□□ 0.59
CASQ2O14958 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
CASQ2O14958 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CASQ2O14958 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CASQ2O14958 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CASQ2O14958 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
CASQ2O14958 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.7■□□□□ 0.58
CASQ2O14958 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CASQ2O14958 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CASQ2O14958 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms