Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 VTI1BP4-201ENST00000427516 527 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 MORF4-201ENST00000447135 971 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AL354872.1-201ENST00000456361 967 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC009567.2-201ENST00000502989 349 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 RNA5SP418-201ENST00000515951 117 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 IGHV4-55-201ENST00000520889 368 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 OR6M2P-201ENST00000529831 871 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 RN7SL32P-201ENST00000580514 281 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 RNU4ATAC-201ENST00000580972 127 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC097641.3-201ENST00000613523 464 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC000095.2-202ENST00000637415 154 ntBASIC5.5□□□□□ -1.53
COPS3Q9UNS2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.5□□□□□ -1.53
COPS3Q9UNS2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC022325.1-201ENST00000502748 2199 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 MIR27A-201ENST00000385073 78 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC092646.1-201ENST00000427142 901 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 RN7SL369P-201ENST00000477138 299 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 CYP4F27P-201ENST00000514557 494 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 OR9G2P-201ENST00000533326 880 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC092865.1-201ENST00000544395 1023 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AP001267.4-201ENST00000602598 545 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AC114876.1-201ENST00000490962 1366 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 SMG1P5-202ENST00000529428 4219 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 SMG1P2-201ENST00000566127 4221 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 MRRFP1-201ENST00000435941 1675 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 OR9K1P-202ENST00000641111 3217 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPS3Q9UNS2 AL359955.1-201ENST00000455242 3275 ntBASIC5.49□□□□□ -1.53
COPS3Q9UNS2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.48□□□□□ -1.53
COPS3Q9UNS2 AL096800.1-201ENST00000405326 893 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms