RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
PTPRT-201ENST00000356100 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
PTPRT-201ENST00000356100 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
PTPRT-201ENST00000356100 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
PTPRT-201ENST00000356100 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
PTPRT-201ENST00000356100 APLP2Q06481 763 aa9.45□□□□□ -0.9
PTPRT-201ENST00000356100 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
PTPRT-201ENST00000356100 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.93
PTPRT-201ENST00000356100 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
PTPRT-201ENST00000356100 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
PTPRT-201ENST00000356100 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
PTPRT-201ENST00000356100 MYT1Q01538 1121 aa9.09□□□□□ -0.95
PTPRT-201ENST00000356100 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
PTPRT-201ENST00000356100 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
PTPRT-201ENST00000356100 NEFLP07196 543 aa8.96□□□□□ -0.97
PTPRT-201ENST00000356100 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
PTPRT-201ENST00000356100 TTBK1Q5TCY1 1321 aaPredicted RBP8.92□□□□□ -0.98
PTPRT-201ENST00000356100 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
PTPRT-201ENST00000356100 ATP1B4Q9UN42 357 aaPredicted RBP8.81□□□□□ -1
PTPRT-201ENST00000356100 YTHDC1Q96MU7 727 aaKnown RBP8.78□□□□□ -1
PTPRT-201ENST00000356100 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
PTPRT-201ENST00000356100 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
PTPRT-201ENST00000356100 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
PTPRT-201ENST00000356100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
PTPRT-201ENST00000356100 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
PTPRT-201ENST00000356100 MYT1LQ9UL68 1186 aa8.58□□□□□ -1.04
PTPRT-201ENST00000356100 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
PTPRT-201ENST00000356100 HRCP23327 699 aa8.54□□□□□ -1.04
PTPRT-201ENST00000356100 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
PTPRT-201ENST00000356100 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.04
PTPRT-201ENST00000356100 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
PTPRT-201ENST00000356100 CHIC1Q5VXU3 224 aa8.47□□□□□ -1.05
PTPRT-201ENST00000356100 ITGAEP38570 1179 aa8.46□□□□□ -1.05
PTPRT-201ENST00000356100 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
PTPRT-201ENST00000356100 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
PTPRT-201ENST00000356100 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.07
PTPRT-201ENST00000356100 DIEXFQ68CQ4 756 aaKnown RBP8.39□□□□□ -1.07
PTPRT-201ENST00000356100 SLC4A1APQ9BWU0 796 aaKnown RBP8.39□□□□□ -1.07
PTPRT-201ENST00000356100 ABCC9O60706 1549 aa8.38□□□□□ -1.07
PTPRT-201ENST00000356100 NEFMP07197 916 aa8.37□□□□□ -1.07
PTPRT-201ENST00000356100 ANP32CO43423 234 aa8.37□□□□□ -1.07
PTPRT-201ENST00000356100 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
PTPRT-201ENST00000356100 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
PTPRT-201ENST00000356100 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
PTPRT-201ENST00000356100 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
PTPRT-201ENST00000356100 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
PTPRT-201ENST00000356100 SCRIBQ14160 1630 aa8.28□□□□□ -1.08
PTPRT-201ENST00000356100 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
PTPRT-201ENST00000356100 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
PTPRT-201ENST00000356100 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
PTPRT-201ENST00000356100 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
PTPRT-201ENST00000356100 ANP32AP39687 249 aaKnown RBP8.23□□□□□ -1.09
PTPRT-201ENST00000356100 CNGB1Q14028 1251 aaPredicted RBP8.23□□□□□ -1.09
PTPRT-201ENST00000356100 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
PTPRT-201ENST00000356100 NEUROD1Q13562 356 aa8.21□□□□□ -1.09
PTPRT-201ENST00000356100 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.09
PTPRT-201ENST00000356100 CSRNP3Q8WYN3 585 aa8.2□□□□□ -1.1
PTPRT-201ENST00000356100 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRT-201ENST00000356100 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
PTPRT-201ENST00000356100 TONSLQ96HA7 1378 aa8.19□□□□□ -1.1
PTPRT-201ENST00000356100 EEA1Q15075 1411 aa8.19□□□□□ -1.1
PTPRT-201ENST00000356100 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
PTPRT-201ENST00000356100 FBLN2P98095 1184 aa8.18□□□□□ -1.1
PTPRT-201ENST00000356100 NACADO15069 1562 aa8.16□□□□□ -1.1
PTPRT-201ENST00000356100 BCANQ96GW7 911 aa8.13□□□□□ -1.11
PTPRT-201ENST00000356100 HSP90AA1P07900 732 aaKnown RBP8.12□□□□□ -1.11
PTPRT-201ENST00000356100 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.11□□□□□ -1.11
PTPRT-201ENST00000356100 EIF5BO60841 1220 aaKnown RBP8.11□□□□□ -1.11
PTPRT-201ENST00000356100 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
PTPRT-201ENST00000356100 RSF1Q96T23 1441 aaPredicted RBP8.1□□□□□ -1.11
PTPRT-201ENST00000356100 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRT-201ENST00000356100 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
PTPRT-201ENST00000356100 STAG3Q9UJ98 1225 aa8.08□□□□□ -1.12
PTPRT-201ENST00000356100 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
PTPRT-201ENST00000356100 GOLGA3Q08378 1498 aa8.06□□□□□ -1.12
PTPRT-201ENST00000356100 MTUS2Q5JR59 1369 aa8.06□□□□□ -1.12
PTPRT-201ENST00000356100 CLIP1P30622 1438 aa8.06□□□□□ -1.12
PTPRT-201ENST00000356100 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
PTPRT-201ENST00000356100 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
PTPRT-201ENST00000356100 ANP32EQ9BTT0 268 aa8.05□□□□□ -1.12
PTPRT-201ENST00000356100 TSPY4P0CV99 314 aa8.03□□□□□ -1.12
PTPRT-201ENST00000356100 TSPY10P0CW01 314 aa8.03□□□□□ -1.12
PTPRT-201ENST00000356100 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
PTPRT-201ENST00000356100 BAZ1BQ9UIG0 1483 aaKnown RBP8.02□□□□□ -1.13
PTPRT-201ENST00000356100 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
PTPRT-201ENST00000356100 WDR43Q15061 677 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRT-201ENST00000356100 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
PTPRT-201ENST00000356100 KIF27Q86VH2 1401 aa7.99□□□□□ -1.13
PTPRT-201ENST00000356100 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
PTPRT-201ENST00000356100 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
PTPRT-201ENST00000356100 HNRNPUQ00839 825 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPRT-201ENST00000356100 CCDC136Q96JN2 1154 aa7.97□□□□□ -1.13
PTPRT-201ENST00000356100 BECN1Q14457 450 aa7.97□□□□□ -1.13
PTPRT-201ENST00000356100 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
PTPRT-201ENST00000356100 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.13
PTPRT-201ENST00000356100 CHMP4BQ9H444 224 aaKnown RBP7.96□□□□□ -1.14
PTPRT-201ENST00000356100 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.14
PTPRT-201ENST00000356100 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
PTPRT-201ENST00000356100 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
PTPRT-201ENST00000356100 GOLGA6L22H0YM25 854 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms