RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 NISCHQ9Y2I1 1504 aa11.39□□□□□ -0.59
PPFIBP1-201ENST00000228425 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
PPFIBP1-201ENST00000228425 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
PPFIBP1-201ENST00000228425 CHIC1Q5VXU3 224 aa10.2□□□□□ -0.78
PPFIBP1-201ENST00000228425 CCDC180Q9P1Z9 1646 aa10.19□□□□□ -0.78
PPFIBP1-201ENST00000228425 MYT1Q01538 1121 aa10.16□□□□□ -0.78
PPFIBP1-201ENST00000228425 RANGAP1P46060 587 aaPredicted RBP9.9□□□□□ -0.82
PPFIBP1-201ENST00000228425 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
PPFIBP1-201ENST00000228425 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
PPFIBP1-201ENST00000228425 DCAF1Q9Y4B6 1507 aa9.84□□□□□ -0.83
PPFIBP1-201ENST00000228425 TTBK1Q5TCY1 1321 aaPredicted RBP9.8□□□□□ -0.84
PPFIBP1-201ENST00000228425 ZCCHC6Q5VYS8 1495 aaKnown RBP9.77□□□□□ -0.84
PPFIBP1-201ENST00000228425 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.84
PPFIBP1-201ENST00000228425 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
PPFIBP1-201ENST00000228425 UNC13AQ9UPW8 1703 aa9.7□□□□□ -0.86
PPFIBP1-201ENST00000228425 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
PPFIBP1-201ENST00000228425 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
PPFIBP1-201ENST00000228425 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
PPFIBP1-201ENST00000228425 PLPPR3Q6T4P5 718 aa9.54□□□□□ -0.88
PPFIBP1-201ENST00000228425 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.9
PPFIBP1-201ENST00000228425 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
PPFIBP1-201ENST00000228425 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
PPFIBP1-201ENST00000228425 FAM9AQ8IZU1 332 aaPredicted RBP9.34□□□□□ -0.91
PPFIBP1-201ENST00000228425 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
PPFIBP1-201ENST00000228425 AEBP2Q6ZN18 517 aaPredicted RBP9.24□□□□□ -0.93
PPFIBP1-201ENST00000228425 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
PPFIBP1-201ENST00000228425 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
PPFIBP1-201ENST00000228425 PEG3Q9GZU2 1588 aa9.23□□□□□ -0.93
PPFIBP1-201ENST00000228425 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
PPFIBP1-201ENST00000228425 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
PPFIBP1-201ENST00000228425 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
PPFIBP1-201ENST00000228425 ARXQ96QS3 562 aa9.2□□□□□ -0.94
PPFIBP1-201ENST00000228425 BCANQ96GW7 911 aa9.19□□□□□ -0.94
PPFIBP1-201ENST00000228425 KCNA4P22459 653 aa9.16□□□□□ -0.94
PPFIBP1-201ENST00000228425 APLP2Q06481 763 aa9.16□□□□□ -0.94
PPFIBP1-201ENST00000228425 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.94
PPFIBP1-201ENST00000228425 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.95
PPFIBP1-201ENST00000228425 ABCC9O60706 1549 aa9.15□□□□□ -0.95
PPFIBP1-201ENST00000228425 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
PPFIBP1-201ENST00000228425 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
PPFIBP1-201ENST00000228425 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
PPFIBP1-201ENST00000228425 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
PPFIBP1-201ENST00000228425 NACADO15069 1562 aa9.05□□□□□ -0.96
PPFIBP1-201ENST00000228425 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
PPFIBP1-201ENST00000228425 TAOK2Q9UL54 1235 aa8.99□□□□□ -0.97
PPFIBP1-201ENST00000228425 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.97
PPFIBP1-201ENST00000228425 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
PPFIBP1-201ENST00000228425 PHF23Q9BUL5 403 aaPredicted RBP8.89□□□□□ -0.99
PPFIBP1-201ENST00000228425 SCRIBQ14160 1630 aa8.87□□□□□ -0.99
PPFIBP1-201ENST00000228425 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
PPFIBP1-201ENST00000228425 CECR2Q9BXF3 1484 aa8.84□□□□□ -0.99
PPFIBP1-201ENST00000228425 NEFLP07196 543 aa8.84□□□□□ -0.99
PPFIBP1-201ENST00000228425 MROH2BQ7Z745 1585 aa8.83□□□□□ -1
PPFIBP1-201ENST00000228425 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
PPFIBP1-201ENST00000228425 POLR3GLQ9BT43 218 aa8.81□□□□□ -1
PPFIBP1-201ENST00000228425 ATP1B4Q9UN42 357 aaPredicted RBP8.81□□□□□ -1
PPFIBP1-201ENST00000228425 RB1CC1Q8TDY2 1594 aa8.77□□□□□ -1.01
PPFIBP1-201ENST00000228425 CENPBP07199 599 aaPredicted RBP8.77□□□□□ -1.01
PPFIBP1-201ENST00000228425 MYT1LQ9UL68 1186 aa8.77□□□□□ -1.01
PPFIBP1-201ENST00000228425 SMARCA4P51532 1647 aa8.77□□□□□ -1.01
PPFIBP1-201ENST00000228425 BAZ1AQ9NRL2 1556 aaPredicted RBP8.76□□□□□ -1.01
PPFIBP1-201ENST00000228425 WIZO95785 1651 aa8.75□□□□□ -1.01
PPFIBP1-201ENST00000228425 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
PPFIBP1-201ENST00000228425 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
PPFIBP1-201ENST00000228425 PCGF6Q9BYE7 350 aa8.74□□□□□ -1.01
PPFIBP1-201ENST00000228425 PLCB2Q00722 1185 aa8.72□□□□□ -1.01
PPFIBP1-201ENST00000228425 NBR1Q14596 966 aa8.72□□□□□ -1.01
PPFIBP1-201ENST00000228425 FKBP8Q14318 412 aa8.7□□□□□ -1.02
PPFIBP1-201ENST00000228425 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
PPFIBP1-201ENST00000228425 CDK11AQ9UQ88 783 aaPredicted RBP8.7□□□□□ -1.02
PPFIBP1-201ENST00000228425 PRDM2Q13029 1718 aa8.69□□□□□ -1.02
PPFIBP1-201ENST00000228425 SMARCA2P51531 1590 aa8.67□□□□□ -1.02
PPFIBP1-201ENST00000228425 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
PPFIBP1-201ENST00000228425 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
PPFIBP1-201ENST00000228425 HRCP23327 699 aa8.64□□□□□ -1.03
PPFIBP1-201ENST00000228425 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
PPFIBP1-201ENST00000228425 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
PPFIBP1-201ENST00000228425 ZNF316A6NFI3 1004 aaPredicted RBP8.59□□□□□ -1.03
PPFIBP1-201ENST00000228425 ARID3AQ99856 593 aa8.59□□□□□ -1.03
PPFIBP1-201ENST00000228425 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
PPFIBP1-201ENST00000228425 TRIM26Q12899 539 aaPredicted RBP8.58□□□□□ -1.04
PPFIBP1-201ENST00000228425 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.58□□□□□ -1.04
PPFIBP1-201ENST00000228425 HMGXB3Q12766 1538 aa8.57□□□□□ -1.04
PPFIBP1-201ENST00000228425 CFAP44Q96MT7 982 aa8.56□□□□□ -1.04
PPFIBP1-201ENST00000228425 CLSPNQ9HAW4 1339 aa8.55□□□□□ -1.04
PPFIBP1-201ENST00000228425 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
PPFIBP1-201ENST00000228425 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
PPFIBP1-201ENST00000228425 BIVM-ERCC5R4GMW8 1640 aa8.49□□□□□ -1.05
PPFIBP1-201ENST00000228425 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
PPFIBP1-201ENST00000228425 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
PPFIBP1-201ENST00000228425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
PPFIBP1-201ENST00000228425 HNRNPUL2Q1KMD3 747 aaKnown RBP8.48□□□□□ -1.05
PPFIBP1-201ENST00000228425 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
PPFIBP1-201ENST00000228425 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
PPFIBP1-201ENST00000228425 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
PPFIBP1-201ENST00000228425 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.06
PPFIBP1-201ENST00000228425 ZBTB7CA1YPR0 619 aa8.44□□□□□ -1.06
PPFIBP1-201ENST00000228425 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
PPFIBP1-201ENST00000228425 CNGB1Q14028 1251 aaPredicted RBP8.41□□□□□ -1.06
PPFIBP1-201ENST00000228425 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms