RNA–Protein interactions for RNA: ENST00000619804.1

CPS1-212, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 5 BASIC

Gene CPS1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-212ENST00000619804 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.34
CPS1-212ENST00000619804 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
CPS1-212ENST00000619804 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
CPS1-212ENST00000619804 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
CPS1-212ENST00000619804 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
CPS1-212ENST00000619804 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
CPS1-212ENST00000619804 FOXD1Q16676 465 aa13.5□□□□□ -0.25
CPS1-212ENST00000619804 ADRA2BP18089 450 aa13.15□□□□□ -0.3
CPS1-212ENST00000619804 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
CPS1-212ENST00000619804 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
CPS1-212ENST00000619804 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
CPS1-212ENST00000619804 MSH5O43196 834 aa12.4□□□□□ -0.42
CPS1-212ENST00000619804 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
CPS1-212ENST00000619804 KCNA4P22459 653 aa12.24□□□□□ -0.45
CPS1-212ENST00000619804 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
CPS1-212ENST00000619804 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
CPS1-212ENST00000619804 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
CPS1-212ENST00000619804 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
CPS1-212ENST00000619804 ABCC9O60706 1549 aa11.9□□□□□ -0.5
CPS1-212ENST00000619804 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
CPS1-212ENST00000619804 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
CPS1-212ENST00000619804 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
CPS1-212ENST00000619804 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
CPS1-212ENST00000619804 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
CPS1-212ENST00000619804 NACADO15069 1562 aa11.76□□□□□ -0.53
CPS1-212ENST00000619804 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
CPS1-212ENST00000619804 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
CPS1-212ENST00000619804 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
CPS1-212ENST00000619804 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
CPS1-212ENST00000619804 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
CPS1-212ENST00000619804 HOXD11P31277 338 aaPredicted RBP11.51□□□□□ -0.57
CPS1-212ENST00000619804 DNAJC5BQ9UF47 199 aa11.47□□□□□ -0.57
CPS1-212ENST00000619804 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
CPS1-212ENST00000619804 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
CPS1-212ENST00000619804 UNC13AQ9UPW8 1703 aa11.36□□□□□ -0.59
CPS1-212ENST00000619804 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
CPS1-212ENST00000619804 ZBTB22O15209 634 aa11.25□□□□□ -0.61
CPS1-212ENST00000619804 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
CPS1-212ENST00000619804 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
CPS1-212ENST00000619804 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
CPS1-212ENST00000619804 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPS1-212ENST00000619804 SLC4A2P04920 1241 aa11.12□□□□□ -0.63
CPS1-212ENST00000619804 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
CPS1-212ENST00000619804 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
CPS1-212ENST00000619804 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
CPS1-212ENST00000619804 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
CPS1-212ENST00000619804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPS1-212ENST00000619804 MYCNP04198 464 aaPredicted RBP10.97□□□□□ -0.65
CPS1-212ENST00000619804 RSF1Q96T23 1441 aaPredicted RBP10.95□□□□□ -0.66
CPS1-212ENST00000619804 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
CPS1-212ENST00000619804 EIF4G1Q04637 1599 aaKnown RBP10.93□□□□□ -0.66
CPS1-212ENST00000619804 SMARCA2P51531 1590 aa10.91□□□□□ -0.66
CPS1-212ENST00000619804 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
CPS1-212ENST00000619804 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
CPS1-212ENST00000619804 WIZO95785 1651 aa10.87□□□□□ -0.67
CPS1-212ENST00000619804 U3KPZ7 1027 aaPredicted RBP10.83□□□□□ -0.68
CPS1-212ENST00000619804 ATAD2BQ9ULI0 1458 aa10.83□□□□□ -0.68
CPS1-212ENST00000619804 BAZ1BQ9UIG0 1483 aaKnown RBP10.81□□□□□ -0.68
CPS1-212ENST00000619804 TOP2AP11388 1531 aaKnown RBP10.81□□□□□ -0.68
CPS1-212ENST00000619804 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
CPS1-212ENST00000619804 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
CPS1-212ENST00000619804 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
CPS1-212ENST00000619804 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
CPS1-212ENST00000619804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
CPS1-212ENST00000619804 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
CPS1-212ENST00000619804 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
CPS1-212ENST00000619804 CCDC88BA6NC98 1476 aa10.65□□□□□ -0.71
CPS1-212ENST00000619804 APLP2Q06481 763 aa10.63□□□□□ -0.71
CPS1-212ENST00000619804 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
CPS1-212ENST00000619804 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
CPS1-212ENST00000619804 PRDM2Q13029 1718 aa10.54□□□□□ -0.72
CPS1-212ENST00000619804 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
CPS1-212ENST00000619804 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
CPS1-212ENST00000619804 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
CPS1-212ENST00000619804 CFTRP13569 1480 aa10.5□□□□□ -0.73
CPS1-212ENST00000619804 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.74
CPS1-212ENST00000619804 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
CPS1-212ENST00000619804 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
CPS1-212ENST00000619804 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
CPS1-212ENST00000619804 CAPN15O75808 1086 aa10.42□□□□□ -0.74
CPS1-212ENST00000619804 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
CPS1-212ENST00000619804 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
CPS1-212ENST00000619804 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
CPS1-212ENST00000619804 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
CPS1-212ENST00000619804 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
CPS1-212ENST00000619804 NESP48681 1621 aa10.36□□□□□ -0.75
CPS1-212ENST00000619804 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
CPS1-212ENST00000619804 TOP2BQ02880 1626 aa10.31□□□□□ -0.76
CPS1-212ENST00000619804 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
CPS1-212ENST00000619804 BIVM-ERCC5R4GMW8 1640 aa10.31□□□□□ -0.76
CPS1-212ENST00000619804 DNMBPQ6XZF7 1577 aa10.29□□□□□ -0.76
CPS1-212ENST00000619804 POLA2Q14181 598 aa10.28□□□□□ -0.76
CPS1-212ENST00000619804 FKBP8Q14318 412 aa10.28□□□□□ -0.76
CPS1-212ENST00000619804 SYNJ1O43426 1573 aa10.27□□□□□ -0.77
CPS1-212ENST00000619804 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
CPS1-212ENST00000619804 EEA1Q15075 1411 aa10.26□□□□□ -0.77
CPS1-212ENST00000619804 CUX1P39880 1505 aa10.25□□□□□ -0.77
CPS1-212ENST00000619804 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
CPS1-212ENST00000619804 ABCB7O75027 752 aa10.23□□□□□ -0.77
CPS1-212ENST00000619804 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms