RNA–Protein interactions for RNA: ENST00000435941.1

MRRFP1-201, Transcript of mitochondrial ribosome recycling factor pseudogene 1, humanhuman

BASIC

Gene MRRFP1, Length 1,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRFP1-201ENST00000435941 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
MRRFP1-201ENST00000435941 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
MRRFP1-201ENST00000435941 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
MRRFP1-201ENST00000435941 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
MRRFP1-201ENST00000435941 FOXD1Q16676 465 aa19.56■□□□□ 0.72
MRRFP1-201ENST00000435941 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
MRRFP1-201ENST00000435941 MSH5O43196 834 aa18.46■□□□□ 0.55
MRRFP1-201ENST00000435941 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
MRRFP1-201ENST00000435941 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
MRRFP1-201ENST00000435941 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
MRRFP1-201ENST00000435941 ADRA2BP18089 450 aa17.86■□□□□ 0.45
MRRFP1-201ENST00000435941 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
MRRFP1-201ENST00000435941 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
MRRFP1-201ENST00000435941 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
MRRFP1-201ENST00000435941 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
MRRFP1-201ENST00000435941 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
MRRFP1-201ENST00000435941 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
MRRFP1-201ENST00000435941 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
MRRFP1-201ENST00000435941 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
MRRFP1-201ENST00000435941 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
MRRFP1-201ENST00000435941 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
MRRFP1-201ENST00000435941 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
MRRFP1-201ENST00000435941 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
MRRFP1-201ENST00000435941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
MRRFP1-201ENST00000435941 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
MRRFP1-201ENST00000435941 KCNA4P22459 653 aa14.74□□□□□ -0.05
MRRFP1-201ENST00000435941 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
MRRFP1-201ENST00000435941 POTEHQ6S545 545 aa14.68□□□□□ -0.06
MRRFP1-201ENST00000435941 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
MRRFP1-201ENST00000435941 DSG3P32926 999 aa14.57□□□□□ -0.08
MRRFP1-201ENST00000435941 CAPN15O75808 1086 aa14.56□□□□□ -0.08
MRRFP1-201ENST00000435941 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
MRRFP1-201ENST00000435941 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
MRRFP1-201ENST00000435941 ABCB7O75027 752 aa14.2□□□□□ -0.14
MRRFP1-201ENST00000435941 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
MRRFP1-201ENST00000435941 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
MRRFP1-201ENST00000435941 APLP2Q06481 763 aa14.11□□□□□ -0.15
MRRFP1-201ENST00000435941 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
MRRFP1-201ENST00000435941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
MRRFP1-201ENST00000435941 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
MRRFP1-201ENST00000435941 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
MRRFP1-201ENST00000435941 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
MRRFP1-201ENST00000435941 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
MRRFP1-201ENST00000435941 POLA2Q14181 598 aa13.72□□□□□ -0.21
MRRFP1-201ENST00000435941 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
MRRFP1-201ENST00000435941 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
MRRFP1-201ENST00000435941 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
MRRFP1-201ENST00000435941 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
MRRFP1-201ENST00000435941 ZBTB22O15209 634 aa13.51□□□□□ -0.25
MRRFP1-201ENST00000435941 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
MRRFP1-201ENST00000435941 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
MRRFP1-201ENST00000435941 NISCHQ9Y2I1 1504 aa13.43□□□□□ -0.26
MRRFP1-201ENST00000435941 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
MRRFP1-201ENST00000435941 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
MRRFP1-201ENST00000435941 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
MRRFP1-201ENST00000435941 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
MRRFP1-201ENST00000435941 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
MRRFP1-201ENST00000435941 HAX1O00165 279 aa13.28□□□□□ -0.28
MRRFP1-201ENST00000435941 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
MRRFP1-201ENST00000435941 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.3
MRRFP1-201ENST00000435941 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
MRRFP1-201ENST00000435941 EVX2Q03828 476 aa13.08□□□□□ -0.31
MRRFP1-201ENST00000435941 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
MRRFP1-201ENST00000435941 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
MRRFP1-201ENST00000435941 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
MRRFP1-201ENST00000435941 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
MRRFP1-201ENST00000435941 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
MRRFP1-201ENST00000435941 FBLN2P98095 1184 aa12.85□□□□□ -0.35
MRRFP1-201ENST00000435941 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
MRRFP1-201ENST00000435941 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
MRRFP1-201ENST00000435941 GABBR2O75899 941 aa12.74□□□□□ -0.37
MRRFP1-201ENST00000435941 ABCC9O60706 1549 aa12.73□□□□□ -0.37
MRRFP1-201ENST00000435941 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
MRRFP1-201ENST00000435941 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
MRRFP1-201ENST00000435941 LHX8Q68G74 356 aa12.7□□□□□ -0.38
MRRFP1-201ENST00000435941 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
MRRFP1-201ENST00000435941 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
MRRFP1-201ENST00000435941 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
MRRFP1-201ENST00000435941 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
MRRFP1-201ENST00000435941 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
MRRFP1-201ENST00000435941 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
MRRFP1-201ENST00000435941 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
MRRFP1-201ENST00000435941 CLCN6P51797 869 aa12.32□□□□□ -0.44
MRRFP1-201ENST00000435941 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
MRRFP1-201ENST00000435941 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
MRRFP1-201ENST00000435941 FKBP8Q14318 412 aa12.26□□□□□ -0.45
MRRFP1-201ENST00000435941 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
MRRFP1-201ENST00000435941 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
MRRFP1-201ENST00000435941 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
MRRFP1-201ENST00000435941 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
MRRFP1-201ENST00000435941 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
MRRFP1-201ENST00000435941 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
MRRFP1-201ENST00000435941 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
MRRFP1-201ENST00000435941 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
MRRFP1-201ENST00000435941 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
MRRFP1-201ENST00000435941 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
MRRFP1-201ENST00000435941 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
MRRFP1-201ENST00000435941 POTEMA6NI47 508 aa11.98□□□□□ -0.49
MRRFP1-201ENST00000435941 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
MRRFP1-201ENST00000435941 POTEGQ6S5H5 508 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms