RNA–Protein interactions for RNA: ENST00000504082.1

AC004069.1-201, humanhuman

TSL 4 BASIC

Gene AC004069.1, Length 549 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004069.1-201ENST00000504082 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
AC004069.1-201ENST00000504082 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
AC004069.1-201ENST00000504082 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
AC004069.1-201ENST00000504082 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
AC004069.1-201ENST00000504082 FOXD1Q16676 465 aa13.19□□□□□ -0.3
AC004069.1-201ENST00000504082 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
AC004069.1-201ENST00000504082 PPP6R1Q9UPN7 881 aa12.57□□□□□ -0.4
AC004069.1-201ENST00000504082 ADRA2BP18089 450 aa12.54□□□□□ -0.4
AC004069.1-201ENST00000504082 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
AC004069.1-201ENST00000504082 MSH5O43196 834 aa12.45□□□□□ -0.42
AC004069.1-201ENST00000504082 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
AC004069.1-201ENST00000504082 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
AC004069.1-201ENST00000504082 PPP4R3CPQ6ZMV5 832 aa11.27□□□□□ -0.61
AC004069.1-201ENST00000504082 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
AC004069.1-201ENST00000504082 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
AC004069.1-201ENST00000504082 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
AC004069.1-201ENST00000504082 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
AC004069.1-201ENST00000504082 HOXD11P31277 338 aaPredicted RBP10.82□□□□□ -0.68
AC004069.1-201ENST00000504082 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
AC004069.1-201ENST00000504082 KCNA4P22459 653 aa10.78□□□□□ -0.68
AC004069.1-201ENST00000504082 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
AC004069.1-201ENST00000504082 NPM3O75607 178 aaKnown RBP10.76□□□□□ -0.69
AC004069.1-201ENST00000504082 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
AC004069.1-201ENST00000504082 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
AC004069.1-201ENST00000504082 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
AC004069.1-201ENST00000504082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
AC004069.1-201ENST00000504082 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
AC004069.1-201ENST00000504082 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
AC004069.1-201ENST00000504082 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
AC004069.1-201ENST00000504082 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
AC004069.1-201ENST00000504082 SPINK5Q9NQ38 1064 aaPredicted RBP10.09□□□□□ -0.79
AC004069.1-201ENST00000504082 CAPN15O75808 1086 aa9.99□□□□□ -0.81
AC004069.1-201ENST00000504082 ZBTB22O15209 634 aa9.97□□□□□ -0.81
AC004069.1-201ENST00000504082 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
AC004069.1-201ENST00000504082 TRHP20396 242 aaPredicted RBP9.91□□□□□ -0.82
AC004069.1-201ENST00000504082 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
AC004069.1-201ENST00000504082 ABCB7O75027 752 aa9.86□□□□□ -0.83
AC004069.1-201ENST00000504082 DSG3P32926 999 aa9.86□□□□□ -0.83
AC004069.1-201ENST00000504082 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
AC004069.1-201ENST00000504082 MYT1Q01538 1121 aa9.84□□□□□ -0.83
AC004069.1-201ENST00000504082 ATF5Q9Y2D1 282 aaPredicted RBP9.82□□□□□ -0.84
AC004069.1-201ENST00000504082 POTEHQ6S545 545 aa9.79□□□□□ -0.84
AC004069.1-201ENST00000504082 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
AC004069.1-201ENST00000504082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
AC004069.1-201ENST00000504082 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
AC004069.1-201ENST00000504082 ZNF219Q9P2Y4 722 aaPredicted RBP9.71□□□□□ -0.86
AC004069.1-201ENST00000504082 APLP2Q06481 763 aa9.67□□□□□ -0.86
AC004069.1-201ENST00000504082 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
AC004069.1-201ENST00000504082 POLA2Q14181 598 aa9.65□□□□□ -0.86
AC004069.1-201ENST00000504082 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
AC004069.1-201ENST00000504082 TTBK1Q5TCY1 1321 aaPredicted RBP9.46□□□□□ -0.9
AC004069.1-201ENST00000504082 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
AC004069.1-201ENST00000504082 RBM42Q9BTD8 480 aaKnown RBP9.42□□□□□ -0.9
AC004069.1-201ENST00000504082 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
AC004069.1-201ENST00000504082 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
AC004069.1-201ENST00000504082 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
AC004069.1-201ENST00000504082 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
AC004069.1-201ENST00000504082 FBLN2P98095 1184 aa9.2□□□□□ -0.94
AC004069.1-201ENST00000504082 HRCP23327 699 aa9.16□□□□□ -0.94
AC004069.1-201ENST00000504082 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
AC004069.1-201ENST00000504082 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
AC004069.1-201ENST00000504082 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
AC004069.1-201ENST00000504082 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
AC004069.1-201ENST00000504082 SPDYE2BA6NHP3 402 aa9.06□□□□□ -0.96
AC004069.1-201ENST00000504082 SPDYE6P0CI01 402 aa9.06□□□□□ -0.96
AC004069.1-201ENST00000504082 SPDYE2Q495Y8 402 aa9.06□□□□□ -0.96
AC004069.1-201ENST00000504082 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
AC004069.1-201ENST00000504082 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
AC004069.1-201ENST00000504082 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
AC004069.1-201ENST00000504082 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
AC004069.1-201ENST00000504082 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
AC004069.1-201ENST00000504082 ERICH6Q7L0X2 663 aa8.94□□□□□ -0.98
AC004069.1-201ENST00000504082 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
AC004069.1-201ENST00000504082 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
AC004069.1-201ENST00000504082 HAX1O00165 279 aa8.88□□□□□ -0.99
AC004069.1-201ENST00000504082 FXR2P51116 673 aaKnown RBP eCLIP8.88□□□□□ -0.99
AC004069.1-201ENST00000504082 CHADLQ6NUI6 762 aa8.87□□□□□ -0.99
AC004069.1-201ENST00000504082 SPDYE1Q8NFV5 336 aaPredicted RBP8.87□□□□□ -0.99
AC004069.1-201ENST00000504082 PRKAR2AP13861 404 aaKnown RBP8.82□□□□□ -1
AC004069.1-201ENST00000504082 PRR29P0C7W0 189 aa8.79□□□□□ -1
AC004069.1-201ENST00000504082 EVX2Q03828 476 aa8.79□□□□□ -1
AC004069.1-201ENST00000504082 BCL11AQ9H165 835 aa8.77□□□□□ -1.01
AC004069.1-201ENST00000504082 FKBP8Q14318 412 aa8.71□□□□□ -1.02
AC004069.1-201ENST00000504082 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
AC004069.1-201ENST00000504082 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
AC004069.1-201ENST00000504082 SLC24A1O60721 1099 aa8.67□□□□□ -1.02
AC004069.1-201ENST00000504082 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
AC004069.1-201ENST00000504082 PROM2Q8N271 834 aa8.64□□□□□ -1.03
AC004069.1-201ENST00000504082 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
AC004069.1-201ENST00000504082 FAM9AQ8IZU1 332 aaPredicted RBP8.62□□□□□ -1.03
AC004069.1-201ENST00000504082 C19orf67A6NJJ6 358 aa8.6□□□□□ -1.03
AC004069.1-201ENST00000504082 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
AC004069.1-201ENST00000504082 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
AC004069.1-201ENST00000504082 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
AC004069.1-201ENST00000504082 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
AC004069.1-201ENST00000504082 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
AC004069.1-201ENST00000504082 PCGF6Q9BYE7 350 aa8.53□□□□□ -1.04
AC004069.1-201ENST00000504082 GABBR2O75899 941 aa8.52□□□□□ -1.05
AC004069.1-201ENST00000504082 LHX8Q68G74 356 aa8.49□□□□□ -1.05
AC004069.1-201ENST00000504082 MIER1Q8N108 512 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms