RNA–Protein interactions for RNA: ENST00000454520.6

RACGAP1-203, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-203ENST00000454520 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
RACGAP1-203ENST00000454520 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
RACGAP1-203ENST00000454520 ABCC9O60706 1549 aa13.2□□□□□ -0.3
RACGAP1-203ENST00000454520 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
RACGAP1-203ENST00000454520 RB1CC1Q8TDY2 1594 aa12.54□□□□□ -0.4
RACGAP1-203ENST00000454520 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.4
RACGAP1-203ENST00000454520 NACADO15069 1562 aa12.5□□□□□ -0.41
RACGAP1-203ENST00000454520 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
RACGAP1-203ENST00000454520 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
RACGAP1-203ENST00000454520 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
RACGAP1-203ENST00000454520 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
RACGAP1-203ENST00000454520 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
RACGAP1-203ENST00000454520 UNC13AQ9UPW8 1703 aa12.21□□□□□ -0.46
RACGAP1-203ENST00000454520 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
RACGAP1-203ENST00000454520 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
RACGAP1-203ENST00000454520 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
RACGAP1-203ENST00000454520 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
RACGAP1-203ENST00000454520 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
RACGAP1-203ENST00000454520 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
RACGAP1-203ENST00000454520 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
RACGAP1-203ENST00000454520 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
RACGAP1-203ENST00000454520 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
RACGAP1-203ENST00000454520 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
RACGAP1-203ENST00000454520 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
RACGAP1-203ENST00000454520 BAZ1BQ9UIG0 1483 aaKnown RBP11.58□□□□□ -0.56
RACGAP1-203ENST00000454520 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
RACGAP1-203ENST00000454520 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
RACGAP1-203ENST00000454520 WIZO95785 1651 aa11.55□□□□□ -0.56
RACGAP1-203ENST00000454520 HMGXB3Q12766 1538 aa11.46□□□□□ -0.58
RACGAP1-203ENST00000454520 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
RACGAP1-203ENST00000454520 NESP48681 1621 aa11.42□□□□□ -0.58
RACGAP1-203ENST00000454520 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
RACGAP1-203ENST00000454520 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
RACGAP1-203ENST00000454520 CADPSQ9ULU8 1353 aa11.32□□□□□ -0.6
RACGAP1-203ENST00000454520 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
RACGAP1-203ENST00000454520 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
RACGAP1-203ENST00000454520 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
RACGAP1-203ENST00000454520 CFTRP13569 1480 aa11.2□□□□□ -0.62
RACGAP1-203ENST00000454520 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
RACGAP1-203ENST00000454520 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
RACGAP1-203ENST00000454520 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
RACGAP1-203ENST00000454520 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
RACGAP1-203ENST00000454520 CUX2O14529 1486 aa11.05□□□□□ -0.64
RACGAP1-203ENST00000454520 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
RACGAP1-203ENST00000454520 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
RACGAP1-203ENST00000454520 WDR62O43379 1518 aa10.99□□□□□ -0.65
RACGAP1-203ENST00000454520 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
RACGAP1-203ENST00000454520 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
RACGAP1-203ENST00000454520 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
RACGAP1-203ENST00000454520 FBLN2P98095 1184 aa10.96□□□□□ -0.65
RACGAP1-203ENST00000454520 RAD54L2Q9Y4B4 1467 aa10.95□□□□□ -0.66
RACGAP1-203ENST00000454520 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
RACGAP1-203ENST00000454520 SOGA1O94964 1423 aa10.94□□□□□ -0.66
RACGAP1-203ENST00000454520 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.66
RACGAP1-203ENST00000454520 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
RACGAP1-203ENST00000454520 CUX1P39880 1505 aa10.92□□□□□ -0.66
RACGAP1-203ENST00000454520 ZNF608Q9ULD9 1512 aaPredicted RBP10.92□□□□□ -0.66
RACGAP1-203ENST00000454520 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■■■■□ 20
RACGAP1-203ENST00000454520 POLA1P09884 1462 aaPredicted RBP10.91□□□□□ -0.66
RACGAP1-203ENST00000454520 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
RACGAP1-203ENST00000454520 TRIM41Q8WV44 630 aa10.9□□□□□ -0.67
RACGAP1-203ENST00000454520 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
RACGAP1-203ENST00000454520 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
RACGAP1-203ENST00000454520 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
RACGAP1-203ENST00000454520 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
RACGAP1-203ENST00000454520 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
RACGAP1-203ENST00000454520 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
RACGAP1-203ENST00000454520 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
RACGAP1-203ENST00000454520 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
RACGAP1-203ENST00000454520 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
RACGAP1-203ENST00000454520 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
RACGAP1-203ENST00000454520 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.68
RACGAP1-203ENST00000454520 CHIC1Q5VXU3 224 aa10.75□□□□□ -0.69
RACGAP1-203ENST00000454520 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
RACGAP1-203ENST00000454520 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
RACGAP1-203ENST00000454520 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
RACGAP1-203ENST00000454520 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
RACGAP1-203ENST00000454520 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
RACGAP1-203ENST00000454520 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
RACGAP1-203ENST00000454520 TTBK1Q5TCY1 1321 aaPredicted RBP10.67□□□□□ -0.7
RACGAP1-203ENST00000454520 IGF1RP08069 1367 aa10.66□□□□□ -0.7
RACGAP1-203ENST00000454520 RANGAP1P46060 587 aaPredicted RBP10.66□□□□□ -0.7
RACGAP1-203ENST00000454520 MAGI1Q96QZ7 1491 aaPredicted RBP10.65□□□□□ -0.7
RACGAP1-203ENST00000454520 CYB5RLQ6IPT4 315 aa10.64□□□□□ -0.71
RACGAP1-203ENST00000454520 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
RACGAP1-203ENST00000454520 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
RACGAP1-203ENST00000454520 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
RACGAP1-203ENST00000454520 CHD1O14646 1710 aa10.63□□□□□ -0.71
RACGAP1-203ENST00000454520 PBRM1Q86U86 1689 aa10.63□□□□□ -0.71
RACGAP1-203ENST00000454520 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
RACGAP1-203ENST00000454520 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
RACGAP1-203ENST00000454520 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
RACGAP1-203ENST00000454520 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
RACGAP1-203ENST00000454520 ERICH3Q5RHP9 1530 aa10.59□□□□□ -0.71
RACGAP1-203ENST00000454520 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
RACGAP1-203ENST00000454520 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
RACGAP1-203ENST00000454520 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
RACGAP1-203ENST00000454520 P3H3Q8IVL6 736 aa10.53□□□□□ -0.72
RACGAP1-203ENST00000454520 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
RACGAP1-203ENST00000454520 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms