RNA–Protein interactions for RNA: ENST00000419905.5

LINC01393-201, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2 BASIC

Gene LINC01393, Length 746 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-201ENST00000419905 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
LINC01393-201ENST00000419905 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
LINC01393-201ENST00000419905 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
LINC01393-201ENST00000419905 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
LINC01393-201ENST00000419905 POTEDQ86YR6 584 aa22.29■■□□□ 1.16
LINC01393-201ENST00000419905 FOXD1Q16676 465 aa21.87■■□□□ 1.09
LINC01393-201ENST00000419905 MSH5O43196 834 aa20.85■□□□□ 0.93
LINC01393-201ENST00000419905 PIAS4Q8N2W9 510 aaPredicted RBP20.23■□□□□ 0.83
LINC01393-201ENST00000419905 PPP6R1Q9UPN7 881 aa19.76■□□□□ 0.75
LINC01393-201ENST00000419905 ADRA2BP18089 450 aa19.65■□□□□ 0.74
LINC01393-201ENST00000419905 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
LINC01393-201ENST00000419905 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
LINC01393-201ENST00000419905 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
LINC01393-201ENST00000419905 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
LINC01393-201ENST00000419905 SCAF1Q9H7N4 1312 aaKnown RBP18.05■□□□□ 0.48
LINC01393-201ENST00000419905 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
LINC01393-201ENST00000419905 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
LINC01393-201ENST00000419905 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
LINC01393-201ENST00000419905 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
LINC01393-201ENST00000419905 POTEHQ6S545 545 aa17.21■□□□□ 0.35
LINC01393-201ENST00000419905 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
LINC01393-201ENST00000419905 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
LINC01393-201ENST00000419905 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
LINC01393-201ENST00000419905 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
LINC01393-201ENST00000419905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC01393-201ENST00000419905 DSG3P32926 999 aa16.26■□□□□ 0.19
LINC01393-201ENST00000419905 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
LINC01393-201ENST00000419905 CAPN15O75808 1086 aa16.15■□□□□ 0.18
LINC01393-201ENST00000419905 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
LINC01393-201ENST00000419905 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
LINC01393-201ENST00000419905 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
LINC01393-201ENST00000419905 ABCB7O75027 752 aa15.67■□□□□ 0.1
LINC01393-201ENST00000419905 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
LINC01393-201ENST00000419905 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
LINC01393-201ENST00000419905 APLP2Q06481 763 aa15.63■□□□□ 0.09
LINC01393-201ENST00000419905 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
LINC01393-201ENST00000419905 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
LINC01393-201ENST00000419905 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
LINC01393-201ENST00000419905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
LINC01393-201ENST00000419905 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
LINC01393-201ENST00000419905 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
LINC01393-201ENST00000419905 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
LINC01393-201ENST00000419905 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
LINC01393-201ENST00000419905 POLA2Q14181 598 aa15.07■□□□□ 0
LINC01393-201ENST00000419905 AKT1S1Q96B36 256 aa15.02■□□□□ -0
LINC01393-201ENST00000419905 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
LINC01393-201ENST00000419905 HAX1O00165 279 aa14.97□□□□□ -0.01
LINC01393-201ENST00000419905 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
LINC01393-201ENST00000419905 KCNA4P22459 653 aa14.81□□□□□ -0.04
LINC01393-201ENST00000419905 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
LINC01393-201ENST00000419905 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
LINC01393-201ENST00000419905 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
LINC01393-201ENST00000419905 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
LINC01393-201ENST00000419905 EVX2Q03828 476 aa14.67□□□□□ -0.06
LINC01393-201ENST00000419905 PLSCR2Q9NRY7 297 aa14.67□□□□□ -0.06
LINC01393-201ENST00000419905 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
LINC01393-201ENST00000419905 LHX8Q68G74 356 aa14.55□□□□□ -0.08
LINC01393-201ENST00000419905 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
LINC01393-201ENST00000419905 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
LINC01393-201ENST00000419905 GABBR2O75899 941 aa14.32□□□□□ -0.12
LINC01393-201ENST00000419905 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
LINC01393-201ENST00000419905 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
LINC01393-201ENST00000419905 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
LINC01393-201ENST00000419905 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
LINC01393-201ENST00000419905 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
LINC01393-201ENST00000419905 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
LINC01393-201ENST00000419905 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
LINC01393-201ENST00000419905 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
LINC01393-201ENST00000419905 FBLN2P98095 1184 aa13.99□□□□□ -0.17
LINC01393-201ENST00000419905 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
LINC01393-201ENST00000419905 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
LINC01393-201ENST00000419905 CLCN6P51797 869 aa13.87□□□□□ -0.19
LINC01393-201ENST00000419905 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
LINC01393-201ENST00000419905 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
LINC01393-201ENST00000419905 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
LINC01393-201ENST00000419905 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
LINC01393-201ENST00000419905 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
LINC01393-201ENST00000419905 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
LINC01393-201ENST00000419905 POTEMA6NI47 508 aa13.76□□□□□ -0.21
LINC01393-201ENST00000419905 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
LINC01393-201ENST00000419905 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
LINC01393-201ENST00000419905 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
LINC01393-201ENST00000419905 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
LINC01393-201ENST00000419905 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC01393-201ENST00000419905 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
LINC01393-201ENST00000419905 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
LINC01393-201ENST00000419905 ZBTB22O15209 634 aa13.57□□□□□ -0.24
LINC01393-201ENST00000419905 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
LINC01393-201ENST00000419905 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
LINC01393-201ENST00000419905 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
LINC01393-201ENST00000419905 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
LINC01393-201ENST00000419905 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
LINC01393-201ENST00000419905 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
LINC01393-201ENST00000419905 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
LINC01393-201ENST00000419905 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
LINC01393-201ENST00000419905 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.29
LINC01393-201ENST00000419905 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
LINC01393-201ENST00000419905 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
LINC01393-201ENST00000419905 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
LINC01393-201ENST00000419905 C7P10643 843 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms