RNA–Protein interactions for RNA: ENST00000455242.1

AL359955.1-201, humanhuman

BASIC

Gene AL359955.1, Length 3,275 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359955.1-201ENST00000455242 NISCHQ9Y2I1 1504 aa11.42□□□□□ -0.58
AL359955.1-201ENST00000455242 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
AL359955.1-201ENST00000455242 SUPT5HO00267 1087 aaKnown RBP10.31□□□□□ -0.76
AL359955.1-201ENST00000455242 DCAF8L2P0C7V8 631 aa10.13□□□□□ -0.79
AL359955.1-201ENST00000455242 PCGF6Q9BYE7 350 aa9.92□□□□□ -0.82
AL359955.1-201ENST00000455242 PPARGC1BQ86YN6 1023 aaKnown RBP9.83□□□□□ -0.84
AL359955.1-201ENST00000455242 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
AL359955.1-201ENST00000455242 HRCP23327 699 aa9.8□□□□□ -0.84
AL359955.1-201ENST00000455242 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
AL359955.1-201ENST00000455242 LOC105371045A0A1W2PR82 267 aa9.74□□□□□ -0.85
AL359955.1-201ENST00000455242 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
AL359955.1-201ENST00000455242 ZCCHC6Q5VYS8 1495 aaKnown RBP9.64□□□□□ -0.87
AL359955.1-201ENST00000455242 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
AL359955.1-201ENST00000455242 TRIM26Q12899 539 aaPredicted RBP9.47□□□□□ -0.89
AL359955.1-201ENST00000455242 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
AL359955.1-201ENST00000455242 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
AL359955.1-201ENST00000455242 CCDC180Q9P1Z9 1646 aa9.41□□□□□ -0.9
AL359955.1-201ENST00000455242 DCAF1Q9Y4B6 1507 aa9.37□□□□□ -0.91
AL359955.1-201ENST00000455242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.27□□□□□ -0.92
AL359955.1-201ENST00000455242 ZEB1P37275 1124 aaPredicted RBP9.25□□□□□ -0.93
AL359955.1-201ENST00000455242 SCRIBQ14160 1630 aa9.24□□□□□ -0.93
AL359955.1-201ENST00000455242 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
AL359955.1-201ENST00000455242 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
AL359955.1-201ENST00000455242 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
AL359955.1-201ENST00000455242 RB1CC1Q8TDY2 1594 aa9.16□□□□□ -0.94
AL359955.1-201ENST00000455242 ABCC9O60706 1549 aa9.12□□□□□ -0.95
AL359955.1-201ENST00000455242 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
AL359955.1-201ENST00000455242 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
AL359955.1-201ENST00000455242 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
AL359955.1-201ENST00000455242 CECR2Q9BXF3 1484 aa9.07□□□□□ -0.96
AL359955.1-201ENST00000455242 DIEXFQ68CQ4 756 aaKnown RBP9.07□□□□□ -0.96
AL359955.1-201ENST00000455242 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
AL359955.1-201ENST00000455242 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
AL359955.1-201ENST00000455242 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
AL359955.1-201ENST00000455242 ACIN1Q9UKV3 1341 aaKnown RBP9.03□□□□□ -0.96
AL359955.1-201ENST00000455242 HNRNPUL2Q1KMD3 747 aaKnown RBP9.01□□□□□ -0.97
AL359955.1-201ENST00000455242 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
AL359955.1-201ENST00000455242 MROH2BQ7Z745 1585 aa8.99□□□□□ -0.97
AL359955.1-201ENST00000455242 WIZO95785 1651 aa8.95□□□□□ -0.98
AL359955.1-201ENST00000455242 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
AL359955.1-201ENST00000455242 PABPN1Q86U42 306 aaKnown RBP eCLIP8.9□□□□□ -0.99
AL359955.1-201ENST00000455242 CCDC88BA6NC98 1476 aa8.89□□□□□ -0.99
AL359955.1-201ENST00000455242 SOGA1O94964 1423 aa8.89□□□□□ -0.99
AL359955.1-201ENST00000455242 CEP162Q5TB80 1403 aa8.89□□□□□ -0.99
AL359955.1-201ENST00000455242 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
AL359955.1-201ENST00000455242 APLP2Q06481 763 aa8.87□□□□□ -0.99
AL359955.1-201ENST00000455242 CSRNP3Q8WYN3 585 aa8.86□□□□□ -0.99
AL359955.1-201ENST00000455242 MIER1Q8N108 512 aa8.86□□□□□ -0.99
AL359955.1-201ENST00000455242 RUSC2Q8N2Y8 1516 aa8.83□□□□□ -1
AL359955.1-201ENST00000455242 ITGAEP38570 1179 aa8.81□□□□□ -1
AL359955.1-201ENST00000455242 NACADO15069 1562 aa8.78□□□□□ -1
AL359955.1-201ENST00000455242 BAZ1AQ9NRL2 1556 aaPredicted RBP8.76□□□□□ -1.01
AL359955.1-201ENST00000455242 TNIKQ9UKE5 1360 aa8.75□□□□□ -1.01
AL359955.1-201ENST00000455242 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.02
AL359955.1-201ENST00000455242 CLIP1P30622 1438 aa8.7□□□□□ -1.02
AL359955.1-201ENST00000455242 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
AL359955.1-201ENST00000455242 TOP2AP11388 1531 aaKnown RBP8.68□□□□□ -1.02
AL359955.1-201ENST00000455242 BCANQ96GW7 911 aa8.68□□□□□ -1.02
AL359955.1-201ENST00000455242 SMARCA2P51531 1590 aa8.68□□□□□ -1.02
AL359955.1-201ENST00000455242 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
AL359955.1-201ENST00000455242 EIF4G1Q04637 1599 aaKnown RBP8.65□□□□□ -1.02
AL359955.1-201ENST00000455242 SMARCA4P51532 1647 aa8.65□□□□□ -1.02
AL359955.1-201ENST00000455242 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
AL359955.1-201ENST00000455242 EEA1Q15075 1411 aa8.62□□□□□ -1.03
AL359955.1-201ENST00000455242 RAPGEF2Q9Y4G8 1499 aa8.62□□□□□ -1.03
AL359955.1-201ENST00000455242 CEP164Q9UPV0 1460 aa8.61□□□□□ -1.03
AL359955.1-201ENST00000455242 KCNH8Q96L42 1107 aa8.61□□□□□ -1.03
AL359955.1-201ENST00000455242 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
AL359955.1-201ENST00000455242 VPS8Q8N3P4 1428 aa8.6□□□□□ -1.03
AL359955.1-201ENST00000455242 SUPT16HQ9Y5B9 1047 aaKnown RBP8.59□□□□□ -1.03
AL359955.1-201ENST00000455242 MYT1Q01538 1121 aa8.58□□□□□ -1.04
AL359955.1-201ENST00000455242 SYNJ1O43426 1573 aa8.57□□□□□ -1.04
AL359955.1-201ENST00000455242 FAM50AQ14320 339 aaKnown RBP8.57□□□□□ -1.04
AL359955.1-201ENST00000455242 P3H3Q8IVL6 736 aa8.57□□□□□ -1.04
AL359955.1-201ENST00000455242 DDX10Q13206 875 aaKnown RBP8.55□□□□□ -1.04
AL359955.1-201ENST00000455242 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
AL359955.1-201ENST00000455242 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
AL359955.1-201ENST00000455242 FKBP8Q14318 412 aa8.52□□□□□ -1.05
AL359955.1-201ENST00000455242 SIN3AQ96ST3 1273 aa8.52□□□□□ -1.05
AL359955.1-201ENST00000455242 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
AL359955.1-201ENST00000455242 KIF21BO75037 1637 aa8.51□□□□□ -1.05
AL359955.1-201ENST00000455242 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
AL359955.1-201ENST00000455242 TSHZ2Q9NRE2 1034 aa8.48□□□□□ -1.05
AL359955.1-201ENST00000455242 NEFLP07196 543 aa8.47□□□□□ -1.05
AL359955.1-201ENST00000455242 CNGB1Q14028 1251 aaPredicted RBP8.47□□□□□ -1.05
AL359955.1-201ENST00000455242 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
AL359955.1-201ENST00000455242 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.06
AL359955.1-201ENST00000455242 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
AL359955.1-201ENST00000455242 IRX6P78412 446 aaPredicted RBP8.44□□□□□ -1.06
AL359955.1-201ENST00000455242 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
AL359955.1-201ENST00000455242 CLSPNQ9HAW4 1339 aa8.42□□□□□ -1.06
AL359955.1-201ENST00000455242 BICRAQ9NZM4 1560 aa8.41□□□□□ -1.06
AL359955.1-201ENST00000455242 ANP32CO43423 234 aa8.4□□□□□ -1.06
AL359955.1-201ENST00000455242 KIF27Q86VH2 1401 aa8.4□□□□□ -1.07
AL359955.1-201ENST00000455242 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
AL359955.1-201ENST00000455242 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
AL359955.1-201ENST00000455242 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
AL359955.1-201ENST00000455242 PRXQ9BXM0 1461 aa8.36□□□□□ -1.07
AL359955.1-201ENST00000455242 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
AL359955.1-201ENST00000455242 CUX2O14529 1486 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms