RNA–Protein interactions for RNA: ENST00000616028.2

ZNF254-208, Transcript of zinc finger protein 254, humanhuman

TSL 4 BASIC

Gene ZNF254, Length 3,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254-208ENST00000616028 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
ZNF254-208ENST00000616028 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
ZNF254-208ENST00000616028 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.58
ZNF254-208ENST00000616028 ABCC9O60706 1549 aa11.39□□□□□ -0.59
ZNF254-208ENST00000616028 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
ZNF254-208ENST00000616028 ZCCHC6Q5VYS8 1495 aaKnown RBP11.12□□□□□ -0.63
ZNF254-208ENST00000616028 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
ZNF254-208ENST00000616028 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
ZNF254-208ENST00000616028 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
ZNF254-208ENST00000616028 NACADO15069 1562 aa10.77□□□□□ -0.69
ZNF254-208ENST00000616028 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
ZNF254-208ENST00000616028 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.69
ZNF254-208ENST00000616028 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
ZNF254-208ENST00000616028 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
ZNF254-208ENST00000616028 RSF1Q96T23 1441 aaPredicted RBP10.44□□□□□ -0.74
ZNF254-208ENST00000616028 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
ZNF254-208ENST00000616028 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
ZNF254-208ENST00000616028 UNC13AQ9UPW8 1703 aa10.38□□□□□ -0.75
ZNF254-208ENST00000616028 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
ZNF254-208ENST00000616028 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
ZNF254-208ENST00000616028 CHIC1Q5VXU3 224 aa10.3□□□□□ -0.76
ZNF254-208ENST00000616028 BAZ1AQ9NRL2 1556 aaPredicted RBP10.29□□□□□ -0.76
ZNF254-208ENST00000616028 TRIM41Q8WV44 630 aa10.29□□□□□ -0.76
ZNF254-208ENST00000616028 WIZO95785 1651 aa10.29□□□□□ -0.76
ZNF254-208ENST00000616028 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
ZNF254-208ENST00000616028 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
ZNF254-208ENST00000616028 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
ZNF254-208ENST00000616028 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
ZNF254-208ENST00000616028 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.78
ZNF254-208ENST00000616028 CCDC88BA6NC98 1476 aa10.12□□□□□ -0.79
ZNF254-208ENST00000616028 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
ZNF254-208ENST00000616028 SMARCA2P51531 1590 aa10.08□□□□□ -0.8
ZNF254-208ENST00000616028 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
ZNF254-208ENST00000616028 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
ZNF254-208ENST00000616028 CC2D2AQ9P2K1 1620 aa10.06□□□□□ -0.8
ZNF254-208ENST00000616028 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
ZNF254-208ENST00000616028 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
ZNF254-208ENST00000616028 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.81
ZNF254-208ENST00000616028 NESP48681 1621 aa9.91□□□□□ -0.82
ZNF254-208ENST00000616028 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
ZNF254-208ENST00000616028 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.82
ZNF254-208ENST00000616028 TTBK1Q5TCY1 1321 aaPredicted RBP9.9□□□□□ -0.82
ZNF254-208ENST00000616028 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
ZNF254-208ENST00000616028 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
ZNF254-208ENST00000616028 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
ZNF254-208ENST00000616028 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
ZNF254-208ENST00000616028 SOGA1O94964 1423 aa9.83□□□□□ -0.84
ZNF254-208ENST00000616028 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
ZNF254-208ENST00000616028 CFTRP13569 1480 aa9.8□□□□□ -0.84
ZNF254-208ENST00000616028 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
ZNF254-208ENST00000616028 FBLN2P98095 1184 aa9.79□□□□□ -0.84
ZNF254-208ENST00000616028 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
ZNF254-208ENST00000616028 PDS5BQ9NTI5 1447 aa9.77□□□□□ -0.85
ZNF254-208ENST00000616028 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
ZNF254-208ENST00000616028 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
ZNF254-208ENST00000616028 TDRD9Q8NDG6 1382 aaKnown RBP9.72□□□□□ -0.85
ZNF254-208ENST00000616028 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
ZNF254-208ENST00000616028 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
ZNF254-208ENST00000616028 CUX2O14529 1486 aa9.7□□□□□ -0.86
ZNF254-208ENST00000616028 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
ZNF254-208ENST00000616028 PCGF6Q9BYE7 350 aa9.69□□□□□ -0.86
ZNF254-208ENST00000616028 CUX1P39880 1505 aa9.68□□□□□ -0.86
ZNF254-208ENST00000616028 APLP2Q06481 763 aa9.68□□□□□ -0.86
ZNF254-208ENST00000616028 FGD5Q6ZNL6 1462 aa9.67□□□□□ -0.86
ZNF254-208ENST00000616028 KIF27Q86VH2 1401 aa9.67□□□□□ -0.86
ZNF254-208ENST00000616028 LAMC3Q9Y6N6 1575 aa9.63□□□□□ -0.87
ZNF254-208ENST00000616028 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
ZNF254-208ENST00000616028 ARID3CA6NKF2 412 aa9.61□□□□□ -0.87
ZNF254-208ENST00000616028 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
ZNF254-208ENST00000616028 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
ZNF254-208ENST00000616028 TOP2BQ02880 1626 aa9.6□□□□□ -0.87
ZNF254-208ENST00000616028 CARMIL1Q5VZK9 1371 aa9.6□□□□□ -0.87
ZNF254-208ENST00000616028 EEA1Q15075 1411 aa9.6□□□□□ -0.87
ZNF254-208ENST00000616028 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
ZNF254-208ENST00000616028 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
ZNF254-208ENST00000616028 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
ZNF254-208ENST00000616028 IGF1RP08069 1367 aa9.57□□□□□ -0.88
ZNF254-208ENST00000616028 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
ZNF254-208ENST00000616028 MRC2Q9UBG0 1479 aa9.56□□□□□ -0.88
ZNF254-208ENST00000616028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
ZNF254-208ENST00000616028 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
ZNF254-208ENST00000616028 KIF21AQ7Z4S6 1674 aa9.56□□□□□ -0.88
ZNF254-208ENST00000616028 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
ZNF254-208ENST00000616028 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
ZNF254-208ENST00000616028 TNIKQ9UKE5 1360 aa9.53□□□□□ -0.88
ZNF254-208ENST00000616028 CLIP1P30622 1438 aa9.53□□□□□ -0.88
ZNF254-208ENST00000616028 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
ZNF254-208ENST00000616028 ZNF608Q9ULD9 1512 aaPredicted RBP9.5□□□□□ -0.89
ZNF254-208ENST00000616028 BIVM-ERCC5R4GMW8 1640 aa9.5□□□□□ -0.89
ZNF254-208ENST00000616028 ITGAEP38570 1179 aa9.49□□□□□ -0.89
ZNF254-208ENST00000616028 TRIM26Q12899 539 aaPredicted RBP9.47□□□□□ -0.89
ZNF254-208ENST00000616028 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
ZNF254-208ENST00000616028 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
ZNF254-208ENST00000616028 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
ZNF254-208ENST00000616028 PRXQ9BXM0 1461 aa9.43□□□□□ -0.9
ZNF254-208ENST00000616028 GRIN2BQ13224 1484 aa9.4□□□□□ -0.9
ZNF254-208ENST00000616028 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
ZNF254-208ENST00000616028 FHOD3Q2V2M9 1422 aa9.39□□□□□ -0.91
ZNF254-208ENST00000616028 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
ZNF254-208ENST00000616028 FAM50AQ14320 339 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms