RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 NISCHQ9Y2I1 1504 aa13.88□□□□□ -0.19
PDZRN4-203ENST00000539469 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
PDZRN4-203ENST00000539469 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
PDZRN4-203ENST00000539469 CCDC180Q9P1Z9 1646 aa12.21□□□□□ -0.45
PDZRN4-203ENST00000539469 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
PDZRN4-203ENST00000539469 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
PDZRN4-203ENST00000539469 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
PDZRN4-203ENST00000539469 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
PDZRN4-203ENST00000539469 ABCC9O60706 1549 aa11.61□□□□□ -0.55
PDZRN4-203ENST00000539469 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.57
PDZRN4-203ENST00000539469 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
PDZRN4-203ENST00000539469 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
PDZRN4-203ENST00000539469 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
PDZRN4-203ENST00000539469 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
PDZRN4-203ENST00000539469 NACADO15069 1562 aa11.34□□□□□ -0.59
PDZRN4-203ENST00000539469 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
PDZRN4-203ENST00000539469 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
PDZRN4-203ENST00000539469 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
PDZRN4-203ENST00000539469 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
PDZRN4-203ENST00000539469 KCNA4P22459 653 aa11.19□□□□□ -0.62
PDZRN4-203ENST00000539469 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
PDZRN4-203ENST00000539469 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
PDZRN4-203ENST00000539469 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
PDZRN4-203ENST00000539469 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
PDZRN4-203ENST00000539469 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDZRN4-203ENST00000539469 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
PDZRN4-203ENST00000539469 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
PDZRN4-203ENST00000539469 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
PDZRN4-203ENST00000539469 SMARCA4P51532 1647 aa10.73□□□□□ -0.69
PDZRN4-203ENST00000539469 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
PDZRN4-203ENST00000539469 ADRA2BP18089 450 aa10.72□□□□□ -0.69
PDZRN4-203ENST00000539469 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
PDZRN4-203ENST00000539469 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.7
PDZRN4-203ENST00000539469 WIZO95785 1651 aa10.69□□□□□ -0.7
PDZRN4-203ENST00000539469 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
PDZRN4-203ENST00000539469 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
PDZRN4-203ENST00000539469 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
PDZRN4-203ENST00000539469 PEG3Q9GZU2 1588 aa10.59□□□□□ -0.71
PDZRN4-203ENST00000539469 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
PDZRN4-203ENST00000539469 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
PDZRN4-203ENST00000539469 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
PDZRN4-203ENST00000539469 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
PDZRN4-203ENST00000539469 SMARCA2P51531 1590 aa10.52□□□□□ -0.72
PDZRN4-203ENST00000539469 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
PDZRN4-203ENST00000539469 HMGXB3Q12766 1538 aa10.46□□□□□ -0.73
PDZRN4-203ENST00000539469 NCAPD3P42695 1498 aa10.45□□□□□ -0.74
PDZRN4-203ENST00000539469 FOXD1Q16676 465 aa10.43□□□□□ -0.74
PDZRN4-203ENST00000539469 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
PDZRN4-203ENST00000539469 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
PDZRN4-203ENST00000539469 ZBTB22O15209 634 aa10.37□□□□□ -0.75
PDZRN4-203ENST00000539469 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
PDZRN4-203ENST00000539469 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
PDZRN4-203ENST00000539469 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
PDZRN4-203ENST00000539469 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
PDZRN4-203ENST00000539469 CFTRP13569 1480 aa10.2□□□□□ -0.78
PDZRN4-203ENST00000539469 NESP48681 1621 aa10.19□□□□□ -0.78
PDZRN4-203ENST00000539469 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
PDZRN4-203ENST00000539469 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
PDZRN4-203ENST00000539469 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
PDZRN4-203ENST00000539469 LAMC3Q9Y6N6 1575 aa10.15□□□□□ -0.79
PDZRN4-203ENST00000539469 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
PDZRN4-203ENST00000539469 SYNJ1O43426 1573 aa10.11□□□□□ -0.79
PDZRN4-203ENST00000539469 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
PDZRN4-203ENST00000539469 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
PDZRN4-203ENST00000539469 BIVM-ERCC5R4GMW8 1640 aa10.07□□□□□ -0.8
PDZRN4-203ENST00000539469 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
PDZRN4-203ENST00000539469 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
PDZRN4-203ENST00000539469 NPM3O75607 178 aaKnown RBP10.06□□□□□ -0.8
PDZRN4-203ENST00000539469 CUX1P39880 1505 aa10.06□□□□□ -0.8
PDZRN4-203ENST00000539469 TOP2BQ02880 1626 aa10.05□□□□□ -0.8
PDZRN4-203ENST00000539469 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
PDZRN4-203ENST00000539469 FKBP8Q14318 412 aa10.03□□□□□ -0.8
PDZRN4-203ENST00000539469 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
PDZRN4-203ENST00000539469 BCANQ96GW7 911 aa10.03□□□□□ -0.8
PDZRN4-203ENST00000539469 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.8
PDZRN4-203ENST00000539469 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
PDZRN4-203ENST00000539469 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
PDZRN4-203ENST00000539469 URB2Q14146 1524 aaKnown RBP9.99□□□□□ -0.81
PDZRN4-203ENST00000539469 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
PDZRN4-203ENST00000539469 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
PDZRN4-203ENST00000539469 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
PDZRN4-203ENST00000539469 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
PDZRN4-203ENST00000539469 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
PDZRN4-203ENST00000539469 PIAS4Q8N2W9 510 aaPredicted RBP9.94□□□□□ -0.82
PDZRN4-203ENST00000539469 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
PDZRN4-203ENST00000539469 RUSC2Q8N2Y8 1516 aa9.93□□□□□ -0.82
PDZRN4-203ENST00000539469 SOGA1O94964 1423 aa9.93□□□□□ -0.82
PDZRN4-203ENST00000539469 ERCC6Q03468 1493 aa9.93□□□□□ -0.82
PDZRN4-203ENST00000539469 WDR97A6NE52 1622 aa9.92□□□□□ -0.82
PDZRN4-203ENST00000539469 WDR62O43379 1518 aa9.92□□□□□ -0.82
PDZRN4-203ENST00000539469 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
PDZRN4-203ENST00000539469 ARXQ96QS3 562 aa9.9□□□□□ -0.82
PDZRN4-203ENST00000539469 RAD54L2Q9Y4B4 1467 aa9.89□□□□□ -0.83
PDZRN4-203ENST00000539469 FAM9AQ8IZU1 332 aaPredicted RBP9.88□□□□□ -0.83
PDZRN4-203ENST00000539469 TARBP1Q13395 1621 aaKnown RBP9.87□□□□□ -0.83
PDZRN4-203ENST00000539469 CUX2O14529 1486 aa9.86□□□□□ -0.83
PDZRN4-203ENST00000539469 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
PDZRN4-203ENST00000539469 ABCA5Q8WWZ7 1642 aa9.83□□□□□ -0.84
PDZRN4-203ENST00000539469 PPARGC1BQ86YN6 1023 aaKnown RBP9.82□□□□□ -0.84
PDZRN4-203ENST00000539469 EEA1Q15075 1411 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms