RNA–Protein interactions for RNA: ENST00000373187.5

PTPRT-203, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRT, Length 12,453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-203ENST00000373187 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
PTPRT-203ENST00000373187 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
PTPRT-203ENST00000373187 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
PTPRT-203ENST00000373187 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
PTPRT-203ENST00000373187 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
PTPRT-203ENST00000373187 APLP2Q06481 763 aa9.45□□□□□ -0.9
PTPRT-203ENST00000373187 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
PTPRT-203ENST00000373187 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.93
PTPRT-203ENST00000373187 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
PTPRT-203ENST00000373187 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
PTPRT-203ENST00000373187 MYT1Q01538 1121 aa9.09□□□□□ -0.95
PTPRT-203ENST00000373187 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
PTPRT-203ENST00000373187 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
PTPRT-203ENST00000373187 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
PTPRT-203ENST00000373187 NEFLP07196 543 aa8.96□□□□□ -0.97
PTPRT-203ENST00000373187 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
PTPRT-203ENST00000373187 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
PTPRT-203ENST00000373187 ATP1B4Q9UN42 357 aaPredicted RBP8.81□□□□□ -1
PTPRT-203ENST00000373187 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
PTPRT-203ENST00000373187 YTHDC1Q96MU7 727 aaKnown RBP8.78□□□□□ -1
PTPRT-203ENST00000373187 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
PTPRT-203ENST00000373187 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
PTPRT-203ENST00000373187 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
PTPRT-203ENST00000373187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
PTPRT-203ENST00000373187 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
PTPRT-203ENST00000373187 MYT1LQ9UL68 1186 aa8.58□□□□□ -1.04
PTPRT-203ENST00000373187 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
PTPRT-203ENST00000373187 HRCP23327 699 aa8.54□□□□□ -1.04
PTPRT-203ENST00000373187 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.04
PTPRT-203ENST00000373187 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
PTPRT-203ENST00000373187 CHIC1Q5VXU3 224 aa8.47□□□□□ -1.05
PTPRT-203ENST00000373187 ITGAEP38570 1179 aa8.46□□□□□ -1.05
PTPRT-203ENST00000373187 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
PTPRT-203ENST00000373187 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
PTPRT-203ENST00000373187 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.07
PTPRT-203ENST00000373187 DIEXFQ68CQ4 756 aaKnown RBP8.39□□□□□ -1.07
PTPRT-203ENST00000373187 SLC4A1APQ9BWU0 796 aaKnown RBP8.39□□□□□ -1.07
PTPRT-203ENST00000373187 ABCC9O60706 1549 aa8.38□□□□□ -1.07
PTPRT-203ENST00000373187 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
PTPRT-203ENST00000373187 NEFMP07197 916 aa8.37□□□□□ -1.07
PTPRT-203ENST00000373187 ANP32CO43423 234 aa8.37□□□□□ -1.07
PTPRT-203ENST00000373187 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
PTPRT-203ENST00000373187 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
PTPRT-203ENST00000373187 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
PTPRT-203ENST00000373187 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
PTPRT-203ENST00000373187 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
PTPRT-203ENST00000373187 SCRIBQ14160 1630 aa8.28□□□□□ -1.08
PTPRT-203ENST00000373187 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
PTPRT-203ENST00000373187 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
PTPRT-203ENST00000373187 RB1CC1Q8TDY2 1594 aa8.24□□□□□ -1.09
PTPRT-203ENST00000373187 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
PTPRT-203ENST00000373187 ANP32AP39687 249 aaKnown RBP8.23□□□□□ -1.09
PTPRT-203ENST00000373187 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
PTPRT-203ENST00000373187 NEUROD1Q13562 356 aa8.21□□□□□ -1.09
PTPRT-203ENST00000373187 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.09
PTPRT-203ENST00000373187 CSRNP3Q8WYN3 585 aa8.2□□□□□ -1.1
PTPRT-203ENST00000373187 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRT-203ENST00000373187 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
PTPRT-203ENST00000373187 TONSLQ96HA7 1378 aa8.19□□□□□ -1.1
PTPRT-203ENST00000373187 EEA1Q15075 1411 aa8.19□□□□□ -1.1
PTPRT-203ENST00000373187 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
PTPRT-203ENST00000373187 CNGB1Q14028 1251 aaPredicted RBP8.18□□□□□ -1.1
PTPRT-203ENST00000373187 FBLN2P98095 1184 aa8.18□□□□□ -1.1
PTPRT-203ENST00000373187 NACADO15069 1562 aa8.16□□□□□ -1.1
PTPRT-203ENST00000373187 BCANQ96GW7 911 aa8.13□□□□□ -1.11
PTPRT-203ENST00000373187 HSP90AA1P07900 732 aaKnown RBP8.12□□□□□ -1.11
PTPRT-203ENST00000373187 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.11□□□□□ -1.11
PTPRT-203ENST00000373187 EIF5BO60841 1220 aaKnown RBP8.11□□□□□ -1.11
PTPRT-203ENST00000373187 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
PTPRT-203ENST00000373187 RSF1Q96T23 1441 aaPredicted RBP8.1□□□□□ -1.11
PTPRT-203ENST00000373187 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRT-203ENST00000373187 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
PTPRT-203ENST00000373187 STAG3Q9UJ98 1225 aa8.08□□□□□ -1.12
PTPRT-203ENST00000373187 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
PTPRT-203ENST00000373187 GOLGA3Q08378 1498 aa8.06□□□□□ -1.12
PTPRT-203ENST00000373187 MTUS2Q5JR59 1369 aa8.06□□□□□ -1.12
PTPRT-203ENST00000373187 CLIP1P30622 1438 aa8.06□□□□□ -1.12
PTPRT-203ENST00000373187 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
PTPRT-203ENST00000373187 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
PTPRT-203ENST00000373187 ANP32EQ9BTT0 268 aa8.05□□□□□ -1.12
PTPRT-203ENST00000373187 TSPY4P0CV99 314 aa8.03□□□□□ -1.12
PTPRT-203ENST00000373187 TSPY10P0CW01 314 aa8.03□□□□□ -1.12
PTPRT-203ENST00000373187 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
PTPRT-203ENST00000373187 BAZ1BQ9UIG0 1483 aaKnown RBP8.02□□□□□ -1.13
PTPRT-203ENST00000373187 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
PTPRT-203ENST00000373187 WDR43Q15061 677 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRT-203ENST00000373187 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
PTPRT-203ENST00000373187 KIF27Q86VH2 1401 aa7.99□□□□□ -1.13
PTPRT-203ENST00000373187 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
PTPRT-203ENST00000373187 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
PTPRT-203ENST00000373187 HNRNPUQ00839 825 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPRT-203ENST00000373187 CCDC136Q96JN2 1154 aa7.97□□□□□ -1.13
PTPRT-203ENST00000373187 BECN1Q14457 450 aa7.97□□□□□ -1.13
PTPRT-203ENST00000373187 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
PTPRT-203ENST00000373187 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.13
PTPRT-203ENST00000373187 CHMP4BQ9H444 224 aaKnown RBP7.96□□□□□ -1.14
PTPRT-203ENST00000373187 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.14
PTPRT-203ENST00000373187 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
PTPRT-203ENST00000373187 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
PTPRT-203ENST00000373187 GOLGA6L22H0YM25 854 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms