Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 AC004408.2-201ENST00000623613 2777 ntBASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.84■□□□□ 0.61
NIPSNAP3AQ9UFN0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPSNAP3AQ9UFN0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 KRT18P61-201ENST00000585825 1298 ntBASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC010536.3-201ENST00000620306 533 ntBASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 KRT16P6-202ENST00000425692 1426 ntBASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 KRT8P17-201ENST00000453110 1448 ntBASIC18.83■□□□□ 0.6
NIPSNAP3AQ9UFN0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 PTBP1P-201ENST00000554374 1601 ntBASIC18.82■□□□□ 0.6
NIPSNAP3AQ9UFN0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NIPSNAP3AQ9UFN0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.8■□□□□ 0.6
NIPSNAP3AQ9UFN0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms