Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
RTN4Q9NQC3 HCG11-201ENST00000411553 5696 ntBASIC23.19■■□□□ 1.3
RTN4Q9NQC3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN4Q9NQC3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC23.19■■□□□ 1.3
RTN4Q9NQC3 AC068880.1-201ENST00000507289 2297 ntBASIC23.19■■□□□ 1.3
RTN4Q9NQC3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 DUX4L19-201ENST00000557448 1267 ntBASIC23.18■■□□□ 1.3
RTN4Q9NQC3 AC011298.3-201ENST00000615796 283 ntBASIC23.18■■□□□ 1.3
RTN4Q9NQC3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN4Q9NQC3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 AP006587.3-201ENST00000525742 1516 ntBASIC23.17■■□□□ 1.3
RTN4Q9NQC3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
RTN4Q9NQC3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTN4Q9NQC3 AC093484.2-201ENST00000580996 2166 ntBASIC23.16■■□□□ 1.3
RTN4Q9NQC3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RTN4Q9NQC3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTN4Q9NQC3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTN4Q9NQC3 AC046158.3-201ENST00000624947 2558 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms