Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LITAFQ99732 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LITAFQ99732 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LITAFQ99732 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.16□□□□□ -0.3
LITAFQ99732 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LITAFQ99732 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 Z98044.1-201ENST00000632503 1764 ntBASIC13.15□□□□□ -0.3
LITAFQ99732 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LITAFQ99732 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.15□□□□□ -0.3
LITAFQ99732 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
LITAFQ99732 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 AC008175.2-201ENST00000612840 297 ntBASIC13.15□□□□□ -0.3
LITAFQ99732 AC012354.3-201ENST00000623734 483 ntBASIC13.15□□□□□ -0.3
LITAFQ99732 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LITAFQ99732 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LITAFQ99732 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.15□□□□□ -0.3
LITAFQ99732 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LITAFQ99732 AC067852.2-201ENST00000590513 2313 ntBASIC13.14□□□□□ -0.31
LITAFQ99732 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LITAFQ99732 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LITAFQ99732 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LITAFQ99732 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.14□□□□□ -0.31
LITAFQ99732 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.14□□□□□ -0.31
LITAFQ99732 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LITAFQ99732 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 KRT16P2-201ENST00000414673 1423 ntBASIC13.13□□□□□ -0.31
LITAFQ99732 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LITAFQ99732 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LITAFQ99732 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LITAFQ99732 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.13□□□□□ -0.31
LITAFQ99732 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.13□□□□□ -0.31
LITAFQ99732 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms