Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CD47Q08722 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CD47Q08722 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.31■□□□□ 0.52
CD47Q08722 AC116050.2-201ENST00000612102 1779 ntBASIC18.31■□□□□ 0.52
CD47Q08722 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD47Q08722 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.31■□□□□ 0.52
CD47Q08722 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CD47Q08722 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD47Q08722 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD47Q08722 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
CD47Q08722 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 AC019069.1-201ENST00000610008 1333 ntBASIC18.3■□□□□ 0.52
CD47Q08722 AL032819.2-201ENST00000624543 2162 ntBASIC18.3■□□□□ 0.52
CD47Q08722 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.3■□□□□ 0.52
CD47Q08722 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.3■□□□□ 0.52
CD47Q08722 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CD47Q08722 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.3■□□□□ 0.52
CD47Q08722 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD47Q08722 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 AC138932.1-201ENST00000534164 6830 ntBASIC18.29■□□□□ 0.52
CD47Q08722 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD47Q08722 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.29■□□□□ 0.52
CD47Q08722 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.29■□□□□ 0.52
CD47Q08722 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.29■□□□□ 0.52
CD47Q08722 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.29■□□□□ 0.52
CD47Q08722 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.29■□□□□ 0.52
CD47Q08722 SLC7A5P1-201ENST00000568957 537 ntBASIC18.29■□□□□ 0.52
CD47Q08722 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.29■□□□□ 0.52
CD47Q08722 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.29■□□□□ 0.52
CD47Q08722 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.29■□□□□ 0.52
CD47Q08722 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 LINC01465-201ENST00000408887 1940 ntBASIC18.29■□□□□ 0.52
CD47Q08722 AL049812.1-201ENST00000432563 2267 ntBASIC18.29■□□□□ 0.52
CD47Q08722 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.29■□□□□ 0.52
CD47Q08722 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
CD47Q08722 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
CD47Q08722 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD47Q08722 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CD47Q08722 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.28■□□□□ 0.52
CD47Q08722 MYCNOS-205ENST00000641950 531 ntBASIC18.28■□□□□ 0.52
CD47Q08722 RBM17P2-201ENST00000616397 1405 ntBASIC18.28■□□□□ 0.52
CD47Q08722 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD47Q08722 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD47Q08722 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD47Q08722 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CD47Q08722 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CD47Q08722 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD47Q08722 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.27■□□□□ 0.52
CD47Q08722 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms