Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH4P55283 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH4P55283 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH4P55283 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH4P55283 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH4P55283 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH4P55283 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH4P55283 YBX1P10-201ENST00000444752 975 ntBASIC20.23■□□□□ 0.83
CDH4P55283 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH4P55283 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH4P55283 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.23■□□□□ 0.83
CDH4P55283 AC009237.14-201ENST00000609975 1594 ntBASIC20.23■□□□□ 0.83
CDH4P55283 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.23■□□□□ 0.83
CDH4P55283 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH4P55283 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH4P55283 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH4P55283 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH4P55283 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH4P55283 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH4P55283 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH4P55283 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH4P55283 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH4P55283 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH4P55283 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.22■□□□□ 0.83
CDH4P55283 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH4P55283 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH4P55283 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CDH4P55283 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH4P55283 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH4P55283 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDH4P55283 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH4P55283 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH4P55283 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH4P55283 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.21■□□□□ 0.83
CDH4P55283 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH4P55283 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CDH4P55283 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CDH4P55283 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH4P55283 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH4P55283 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH4P55283 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH4P55283 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH4P55283 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CDH4P55283 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.2■□□□□ 0.82
CDH4P55283 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH4P55283 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDH4P55283 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH4P55283 AC008550.1-201ENST00000511500 884 ntBASIC20.2■□□□□ 0.82
CDH4P55283 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH4P55283 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH4P55283 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH4P55283 RARRES2P10-201ENST00000564312 460 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms