Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CALRP27797 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CALRP27797 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.84■□□□□ 0.61
CALRP27797 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CALRP27797 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.84■□□□□ 0.61
CALRP27797 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.84■□□□□ 0.61
CALRP27797 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CALRP27797 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CALRP27797 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.84■□□□□ 0.61
CALRP27797 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CALRP27797 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALRP27797 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CALRP27797 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.83■□□□□ 0.61
CALRP27797 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.83■□□□□ 0.61
CALRP27797 NOC2LP2-201ENST00000407594 1944 ntBASIC18.83■□□□□ 0.6
CALRP27797 AC026471.6-201ENST00000622954 1905 ntBASIC18.83■□□□□ 0.6
CALRP27797 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.83■□□□□ 0.6
CALRP27797 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.83■□□□□ 0.6
CALRP27797 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.83■□□□□ 0.6
CALRP27797 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CALRP27797 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALRP27797 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.82■□□□□ 0.6
CALRP27797 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CALRP27797 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.82■□□□□ 0.6
CALRP27797 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.82■□□□□ 0.6
CALRP27797 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.82■□□□□ 0.6
CALRP27797 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CALRP27797 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALRP27797 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
CALRP27797 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
CALRP27797 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CALRP27797 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
CALRP27797 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CALRP27797 AC104564.3-201ENST00000582367 638 ntBASIC18.81■□□□□ 0.6
CALRP27797 MIR6722-201ENST00000617286 78 ntBASIC18.81■□□□□ 0.6
CALRP27797 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CALRP27797 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CALRP27797 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALRP27797 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CALRP27797 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CALRP27797 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CALRP27797 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CALRP27797 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALRP27797 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
CALRP27797 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CALRP27797 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms