Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TREX1-205ENST00000625293 1783 ntBASIC19.94■□□□□ 0.78
MMP2P08253 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.94■□□□□ 0.78
MMP2P08253 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.94■□□□□ 0.78
MMP2P08253 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.94■□□□□ 0.78
MMP2P08253 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MMP2P08253 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MMP2P08253 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MMP2P08253 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.93■□□□□ 0.78
MMP2P08253 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.93■□□□□ 0.78
MMP2P08253 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.93■□□□□ 0.78
MMP2P08253 AC069544.1-201ENST00000609399 999 ntBASIC19.93■□□□□ 0.78
MMP2P08253 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MMP2P08253 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.92■□□□□ 0.78
MMP2P08253 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.92■□□□□ 0.78
MMP2P08253 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.92■□□□□ 0.78
MMP2P08253 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
MMP2P08253 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MMP2P08253 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
MMP2P08253 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.91■□□□□ 0.78
MMP2P08253 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP2P08253 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
MMP2P08253 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.91■□□□□ 0.78
MMP2P08253 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 POU5F1P3-201ENST00000428824 1078 ntBASIC19.91■□□□□ 0.78
MMP2P08253 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP2P08253 MTDHP1-201ENST00000605323 784 ntBASIC19.91■□□□□ 0.78
MMP2P08253 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
MMP2P08253 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP2P08253 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.91■□□□□ 0.78
MMP2P08253 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.91■□□□□ 0.78
MMP2P08253 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MMP2P08253 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP2P08253 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MMP2P08253 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MMP2P08253 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.9■□□□□ 0.78
MMP2P08253 KRT17P3-201ENST00000420566 1262 ntBASIC19.9■□□□□ 0.78
MMP2P08253 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 TSPY20P-201ENST00000450910 630 ntBASIC19.9■□□□□ 0.78
MMP2P08253 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
MMP2P08253 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.9■□□□□ 0.78
MMP2P08253 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
MMP2P08253 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.9■□□□□ 0.78
MMP2P08253 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
MMP2P08253 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms