Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 RALGDS-213ENST00000493438 4602 ntTSL 214.03□□□□□ -0.162e-6■■■■□ 19.9
CSTF2TQ9H0L4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.65□□□□□ -0.062e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-202ENST00000418385 574 ntTSL 414.35□□□□□ -0.112e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-209ENST00000507665 1143 ntTSL 27.37□□□□□ -1.232e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-205ENST00000504472 588 ntTSL 47.01□□□□□ -1.292e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.32□□□□□ -1.42e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.462e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.58□□□□□ -1.522e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-210ENST00000511644 686 ntTSL 55.41□□□□□ -1.542e-7■■■■□ 19.9
CSTF2TQ9H0L4 EIF4E-211ENST00000515638 738 ntTSL 55.05□□□□□ -1.62e-7■■■■□ 19.9
CSTF2TQ9H0L4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.476e-8■■■■□ 19.9
CSTF2TQ9H0L4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.566e-8■■■■□ 19.9
CSTF2TQ9H0L4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.636e-8■■■■□ 19.9
CSTF2TQ9H0L4 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.13□□□□□ -0.478e-7■■■■□ 19.9
CSTF2TQ9H0L4 TNNT1-217ENST00000593194 721 ntAPPRIS ALT2 TSL 217.37■□□□□ 0.377e-7■■■■□ 19.9
CSTF2TQ9H0L4 TNNT1-214ENST00000589745 529 ntTSL 214.14□□□□□ -0.157e-7■■■■□ 19.9
CSTF2TQ9H0L4 TNNT1-206ENST00000586649 340 ntTSL 57.89□□□□□ -1.157e-7■■■■□ 19.9
CSTF2TQ9H0L4 ANKMY1-223ENST00000489677 292 ntTSL 57.72□□□□□ -1.178e-7■■■■□ 19.9
CSTF2TQ9H0L4 IQSEC1-202ENST00000473088 545 ntTSL 416.02■□□□□ 0.167e-7■■■■□ 19.9
CSTF2TQ9H0L4 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.93□□□□□ -0.58e-7■■■■□ 19.9
CSTF2TQ9H0L4 RPS6KA3-206ENST00000492128 553 ntTSL 49.29□□□□□ -0.924e-17■■■■□ 19.9
CSTF2TQ9H0L4 ZNF581-202ENST00000585995 591 ntTSL 317.9■□□□□ 0.462e-7■■■■□ 19.9
CSTF2TQ9H0L4 CCDC106-208ENST00000592996 741 ntTSL 317.46■□□□□ 0.392e-7■■■■□ 19.9
CSTF2TQ9H0L4 TAL1-206ENST00000481091 504 ntTSL 314.62□□□□□ -0.074e-7■■■■□ 19.9
CSTF2TQ9H0L4 KCNH2-206ENST00000532957 3374 ntTSL 216.84■□□□□ 0.292e-6■■■■□ 19.9
CSTF2TQ9H0L4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.78■□□□□ 0.282e-6■■■■□ 19.9
CSTF2TQ9H0L4 FAM169A-205ENST00000513277 803 ntTSL 316.35■□□□□ 0.218e-11■■■■□ 19.9
CSTF2TQ9H0L4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.13□□□□□ -1.758e-11■■■■□ 19.9
CSTF2TQ9H0L4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.778e-11■■■■□ 19.9
CSTF2TQ9H0L4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.264e-7■■■■□ 19.9
CSTF2TQ9H0L4 CREBRF-206ENST00000523161 559 ntTSL 414.61□□□□□ -0.075e-8■■■■□ 19.9
CSTF2TQ9H0L4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.044e-8■■■■□ 19.9
CSTF2TQ9H0L4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.124e-8■■■■□ 19.9
CSTF2TQ9H0L4 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.544e-8■■■■□ 19.9
CSTF2TQ9H0L4 TRMT2A-218ENST00000492988 854 ntTSL 515.84■□□□□ 0.131e-6■■■■□ 19.9
CSTF2TQ9H0L4 TRMT2A-220ENST00000494820 1098 ntTSL 514.74□□□□□ -0.051e-6■■■■□ 19.9
CSTF2TQ9H0L4 TAOK3-216ENST00000542532 641 ntTSL 224.5■■□□□ 1.512e-6■■■■□ 19.9
CSTF2TQ9H0L4 TAOK3-217ENST00000542692 588 ntTSL 322.97■■□□□ 1.272e-6■■■■□ 19.9
CSTF2TQ9H0L4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-6■■■■□ 19.9
CSTF2TQ9H0L4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.57■□□□□ 0.46e-10■■■■□ 19.9
CSTF2TQ9H0L4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.296e-10■■■■□ 19.9
CSTF2TQ9H0L4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -06e-10■■■■□ 19.9
CSTF2TQ9H0L4 TMC6-224ENST00000593044 3070 ntTSL 214.69□□□□□ -0.066e-10■■■■□ 19.9
CSTF2TQ9H0L4 ACAP3-208ENST00000472541 1946 ntTSL 517.52■□□□□ 0.42e-7■■■■□ 19.9
CSTF2TQ9H0L4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.332e-7■■■■□ 19.9
CSTF2TQ9H0L4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.352e-7■■■■□ 19.9
CSTF2TQ9H0L4 CSNK2A2-206ENST00000567730 947 ntTSL 39.84□□□□□ -0.832e-7■■■■□ 19.9
CSTF2TQ9H0L4 CSNK2A2-205ENST00000566813 1569 ntTSL 58.3□□□□□ -1.082e-7■■■■□ 19.9
CSTF2TQ9H0L4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.189e-7■■■■□ 19.9
CSTF2TQ9H0L4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.65■□□□□ 0.19e-7■■■■□ 19.9
CSTF2TQ9H0L4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.55■□□□□ 0.089e-7■■■■□ 19.9
CSTF2TQ9H0L4 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)16.35■□□□□ 0.213e-8■■■■□ 19.9
CSTF2TQ9H0L4 SMAP2-203ENST00000435168 666 ntTSL 56.41□□□□□ -1.383e-8■■■■□ 19.9
CSTF2TQ9H0L4 BAIAP2-225ENST00000576225 2316 ntTSL 216.77■□□□□ 0.289e-7■■■■□ 19.9
CSTF2TQ9H0L4 PRKAR1B-205ENST00000414568 752 ntTSL 515.36■□□□□ 0.052e-6■■■■□ 19.8
CSTF2TQ9H0L4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.65■■□□□ 1.863e-7■■■■□ 19.8
CSTF2TQ9H0L4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.123e-7■■■■□ 19.8
CSTF2TQ9H0L4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19■□□□□ 0.633e-7■■■■□ 19.8
CSTF2TQ9H0L4 SH3GL1-204ENST00000598219 619 ntTSL 37.57□□□□□ -1.23e-7■■■■□ 19.8
CSTF2TQ9H0L4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.734e-8■■■■□ 19.8
CSTF2TQ9H0L4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.69■□□□□ 0.14e-8■■■■□ 19.8
CSTF2TQ9H0L4 CTDP1-207ENST00000591598 3228 ntTSL 1 (best)15.14■□□□□ 0.014e-8■■■■□ 19.8
CSTF2TQ9H0L4 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.374e-8■■■■□ 19.8
CSTF2TQ9H0L4 CTDP1-206ENST00000590635 489 ntTSL 511.41□□□□□ -0.584e-8■■■■□ 19.8
CSTF2TQ9H0L4 THUMPD3-AS1-204ENST00000480904 493 ntTSL 35.4□□□□□ -1.544e-10■■■■□ 19.8
CSTF2TQ9H0L4 ADAP1-211ENST00000478000 2192 ntTSL 516.4■□□□□ 0.227e-7■■■■□ 19.8
CSTF2TQ9H0L4 ADAP1-206ENST00000453175 742 ntTSL 514.7□□□□□ -0.067e-7■■■■□ 19.8
CSTF2TQ9H0L4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.33■□□□□ 0.042e-6■■■■□ 19.8
CSTF2TQ9H0L4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.292e-6■■■■□ 19.8
CSTF2TQ9H0L4 GNA11-204ENST00000587636 733 ntTSL 513.86□□□□□ -0.193e-6■■■■□ 19.8
CSTF2TQ9H0L4 NAXD-203ENST00000470164 2377 ntTSL 214.69□□□□□ -0.066e-8■■■■□ 19.8
CSTF2TQ9H0L4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.32□□□□□ -0.126e-8■■■■□ 19.8
CSTF2TQ9H0L4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.296e-8■■■■□ 19.8
CSTF2TQ9H0L4 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.137e-12■■■■□ 19.8
CSTF2TQ9H0L4 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.55□□□□□ -1.27e-12■■■■□ 19.8
CSTF2TQ9H0L4 AGO2-210ENST00000524328 316 ntTSL 511.13□□□□□ -0.639e-7■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-222ENST00000575009 1146 ntTSL 524.46■■□□□ 1.518e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)19■□□□□ 0.638e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-225ENST00000576076 914 nt15.48■□□□□ 0.078e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)15.31■□□□□ 0.048e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)13.54□□□□□ -0.248e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.1□□□□□ -0.318e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-212ENST00000572952 1118 ntTSL 212.58□□□□□ -0.48e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-209ENST00000572278 711 ntTSL 28.73□□□□□ -1.018e-37■■■■□ 19.8
CSTF2TQ9H0L4 SRRM2-215ENST00000573498 994 ntTSL 36.85□□□□□ -1.318e-37■■■■□ 19.8
CSTF2TQ9H0L4 ZADH2-204ENST00000582437 671 ntTSL 59.69□□□□□ -0.865e-7■■■■□ 19.8
CSTF2TQ9H0L4 ZADH2-203ENST00000581620 520 ntTSL 48□□□□□ -1.135e-7■■■■□ 19.8
CSTF2TQ9H0L4 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.9□□□□□ -0.52e-6■■■■□ 19.8
CSTF2TQ9H0L4 AC022098.1-203ENST00000592086 449 ntTSL 310.03□□□□□ -0.82e-6■■■■□ 19.8
CSTF2TQ9H0L4 TNS3-205ENST00000434451 560 ntTSL 515.61■□□□□ 0.095e-7■■■■□ 19.8
CSTF2TQ9H0L4 FAM83E-202ENST00000593772 565 ntTSL 316.67■□□□□ 0.262e-7■■■■□ 19.8
CSTF2TQ9H0L4 FAM83E-203ENST00000595110 590 ntTSL 415.64■□□□□ 0.092e-7■■■■□ 19.8
CSTF2TQ9H0L4 FAM83E-204ENST00000599126 477 ntTSL 515.51■□□□□ 0.072e-7■■■■□ 19.8
CSTF2TQ9H0L4 PTK2-218ENST00000519993 4388 ntTSL 1 (best)16.57■□□□□ 0.247e-9■■■■□ 19.8
CSTF2TQ9H0L4 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.66□□□□□ -0.387e-9■■■■□ 19.8
CSTF2TQ9H0L4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.287e-9■■■■□ 19.8
CSTF2TQ9H0L4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.397e-9■■■■□ 19.8
CSTF2TQ9H0L4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.09□□□□□ -1.437e-9■■■■□ 19.8
CSTF2TQ9H0L4 LMBR1-218ENST00000486837 576 ntTSL 27.56□□□□□ -1.22e-8■■■■□ 19.8
Retrieved 100 of 19,151 protein–RNA pairs in 156.6 ms