Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 KRT18P6-201ENST00000555540 1265 ntBASIC17.46■□□□□ 0.39
TMEM54Q969K7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM54Q969K7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM54Q969K7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
TMEM54Q969K7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.46■□□□□ 0.38
TMEM54Q969K7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 RNA5SP413-201ENST00000516373 109 ntBASIC17.45■□□□□ 0.38
TMEM54Q969K7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM54Q969K7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM54Q969K7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 AC008403.3-201ENST00000598924 454 ntBASIC17.44■□□□□ 0.38
TMEM54Q969K7 AL121906.2-201ENST00000621597 723 ntBASIC17.44■□□□□ 0.38
TMEM54Q969K7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM54Q969K7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM54Q969K7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 TREX1-205ENST00000625293 1783 ntBASIC17.43■□□□□ 0.38
TMEM54Q969K7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms