Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CROCCP3Q8IVE0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CROCCP3Q8IVE0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 MIR6724-1-201ENST00000616420 92 ntBASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 MIR6724-2-201ENST00000616483 92 ntBASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 MIR6724-4-201ENST00000617390 92 ntBASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 MIR6724-3-201ENST00000622482 92 ntBASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CROCCP3Q8IVE0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 BX005040.4-201ENST00000637145 1518 ntBASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 AC010525.1-201ENST00000585559 441 ntBASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CROCCP3Q8IVE0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CROCCP3Q8IVE0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CROCCP3Q8IVE0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.46
CROCCP3Q8IVE0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
CROCCP3Q8IVE0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms