Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYVN1Q86TM6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.46■□□□□ 0.71
SYVN1Q86TM6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYVN1Q86TM6 KRT17P1-201ENST00000399211 1546 ntBASIC19.46■□□□□ 0.71
SYVN1Q86TM6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 PTBP1P-201ENST00000554374 1601 ntBASIC19.45■□□□□ 0.7
SYVN1Q86TM6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 UNC93B5-201ENST00000530315 699 ntBASIC19.45■□□□□ 0.7
SYVN1Q86TM6 AC006058.3-201ENST00000606217 1069 ntBASIC19.45■□□□□ 0.7
SYVN1Q86TM6 AL589743.5-201ENST00000616611 1050 ntBASIC19.45■□□□□ 0.7
SYVN1Q86TM6 AP006294.2-201ENST00000641667 209 ntBASIC19.45■□□□□ 0.7
SYVN1Q86TM6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SYVN1Q86TM6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 AC116562.4-201ENST00000641316 2276 ntBASIC19.44■□□□□ 0.7
SYVN1Q86TM6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.44■□□□□ 0.7
SYVN1Q86TM6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.44■□□□□ 0.7
SYVN1Q86TM6 AL355472.2-201ENST00000422958 438 ntBASIC19.44■□□□□ 0.7
SYVN1Q86TM6 AC026366.1-201ENST00000488803 879 ntBASIC19.44■□□□□ 0.7
SYVN1Q86TM6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.44■□□□□ 0.7
SYVN1Q86TM6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 AC098590.1-201ENST00000468126 897 ntBASIC19.43■□□□□ 0.7
SYVN1Q86TM6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYVN1Q86TM6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 GCSHP5-201ENST00000443090 522 ntBASIC19.42■□□□□ 0.7
SYVN1Q86TM6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 AC128676.1-201ENST00000454392 318 ntBASIC19.42■□□□□ 0.7
SYVN1Q86TM6 RPS2P52-201ENST00000469610 820 ntBASIC19.42■□□□□ 0.7
SYVN1Q86TM6 AP003097.1-201ENST00000530657 1135 ntBASIC19.42■□□□□ 0.7
SYVN1Q86TM6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYVN1Q86TM6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms