Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 NOP56-209ENST00000469588 950 ntTSL 218.67■□□□□ 0.581e-8■□□□□ 8.3
DDX59Q5T1V6 MTSS1L-202ENST00000562883 407 ntTSL 216.15■□□□□ 0.181e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-204ENST00000525994 390 ntTSL 414.12□□□□□ -0.151e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-214ENST00000534613 737 ntTSL 513.79□□□□□ -0.21e-8■□□□□ 8.3
DDX59Q5T1V6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.271e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-218ENST00000496775 729 ntTSL 212.06□□□□□ -0.481e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-203ENST00000445139 856 ntTSL 511.85□□□□□ -0.511e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-217ENST00000494697 919 ntTSL 511.8□□□□□ -0.521e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-207ENST00000526732 824 ntTSL 211.51□□□□□ -0.571e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.611e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.611e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-213ENST00000534422 702 ntTSL 510.41□□□□□ -0.741e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-204ENST00000460258 837 ntTSL 410.4□□□□□ -0.741e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.841e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-211ENST00000532402 3718 ntTSL 1 (best)9.59□□□□□ -0.871e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.921e-8■□□□□ 8.3
DDX59Q5T1V6 FBRS-206ENST00000494101 2782 ntTSL 213.85□□□□□ -0.194e-6■□□□□ 8.3
DDX59Q5T1V6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.1■■□□□ 1.452e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-204ENST00000419985 500 ntTSL 419.85■□□□□ 0.772e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-208ENST00000442644 600 ntTSL 317.77■□□□□ 0.442e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.242e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-206ENST00000429925 581 ntTSL 313.18□□□□□ -0.32e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-207ENST00000431364 566 ntTSL 411.37□□□□□ -0.592e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-205ENST00000427769 598 ntTSL 411.05□□□□□ -0.642e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-210ENST00000474030 501 ntTSL 410.07□□□□□ -0.82e-10■□□□□ 8.3
DDX59Q5T1V6 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)7.73□□□□□ -1.171e-8■□□□□ 8.3
DDX59Q5T1V6 RBCK1-212ENST00000468272 1486 ntTSL 519.54■□□□□ 0.723e-17■□□□□ 8.3
DDX59Q5T1V6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.06■□□□□ 0.89e-9■□□□□ 8.2
DDX59Q5T1V6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.69e-9■□□□□ 8.2
DDX59Q5T1V6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.251e-9■□□□□ 8.2
DDX59Q5T1V6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.5■□□□□ 0.552e-10■□□□□ 8.2
DDX59Q5T1V6 ARF3-204ENST00000485410 563 ntTSL 317.37■□□□□ 0.372e-10■□□□□ 8.2
DDX59Q5T1V6 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.422e-10■□□□□ 8.2
DDX59Q5T1V6 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.52e-10■□□□□ 8.2
DDX59Q5T1V6 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.032e-10■□□□□ 8.2
DDX59Q5T1V6 SORBS3-206ENST00000519127 209 ntTSL 216.65■□□□□ 0.265e-8■□□□□ 8.2
DDX59Q5T1V6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.237e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.52□□□□□ -0.257e-6■□□□□ 8.2
DDX59Q5T1V6 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.94□□□□□ -0.347e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.787e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC10.1□□□□□ -0.797e-6■□□□□ 8.2
DDX59Q5T1V6 UBE2Z-206ENST00000511373 769 ntTSL 24.58□□□□□ -1.687e-6■□□□□ 8.2
DDX59Q5T1V6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.213e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.293e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-205ENST00000595223 956 ntTSL 515.74■□□□□ 0.113e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-203ENST00000594745 379 ntTSL 312.71□□□□□ -0.373e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-208ENST00000597656 328 ntTSL 57.67□□□□□ -1.183e-25■□□□□ 8.2
DDX59Q5T1V6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.74■■□□□ 1.714e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-208ENST00000455580 721 ntTSL 321.55■■□□□ 1.044e-6■□□□□ 8.1
DDX59Q5T1V6 RGL2-244ENST00000485077 1020 ntTSL 219.85■□□□□ 0.772e-11■□□□□ 8.1
DDX59Q5T1V6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-205ENST00000420282 570 ntTSL 418.66■□□□□ 0.584e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-206ENST00000427786 569 ntTSL 417.64■□□□□ 0.414e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.154e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.144e-6■□□□□ 8.1
DDX59Q5T1V6 RGL2-239ENST00000460988 754 ntTSL 313.72□□□□□ -0.212e-11■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-207ENST00000441461 584 ntTSL 213.55□□□□□ -0.244e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-209ENST00000464273 577 ntTSL 213.23□□□□□ -0.294e-6■□□□□ 8.1
DDX59Q5T1V6 STAG3L3-202ENST00000428423 2137 ntTSL 312.95□□□□□ -0.344e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-205ENST00000461957 509 ntTSL 512.67□□□□□ -0.384e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.44e-6■□□□□ 8.1
DDX59Q5T1V6 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.99□□□□□ -0.494e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC11.93□□□□□ -0.54e-6■□□□□ 8.1
DDX59Q5T1V6 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC11.52□□□□□ -0.574e-6■□□□□ 8.1
DDX59Q5T1V6 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.784e-6■□□□□ 8.1
DDX59Q5T1V6 ACAA1-210ENST00000451419 964 ntTSL 39.29□□□□□ -0.924e-6■□□□□ 8.1
DDX59Q5T1V6 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.054e-6■□□□□ 8.1
DDX59Q5T1V6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.08□□□□□ -1.124e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-209ENST00000493302 358 ntTSL 56.8□□□□□ -1.324e-6■□□□□ 8.1
DDX59Q5T1V6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.132e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.22□□□□□ -0.132e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-224ENST00000568463 1848 ntTSL 213.8□□□□□ -0.22e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.312e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-211ENST00000563608 626 ntTSL 512.84□□□□□ -0.352e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-223ENST00000567542 3542 ntTSL 1 (best)12.61□□□□□ -0.392e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-225ENST00000568975 2996 ntTSL 210.99□□□□□ -0.652e-12■□□□□ 8.1
DDX59Q5T1V6 NOTUM-203ENST00000477214 813 ntTSL 521.26■□□□□ 0.994e-7■□□□□ 8
DDX59Q5T1V6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.124e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.064e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.234e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.264e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.314e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.1□□□□□ -0.314e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-220ENST00000493859 557 ntTSL 311.64□□□□□ -0.554e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-222ENST00000536195 452 ntTSL 310.7□□□□□ -0.74e-7■□□□□ 8
DDX59Q5T1V6 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC11.18□□□□□ -0.622e-50■□□□□ 8
DDX59Q5T1V6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.243e-12■□□□□ 8
DDX59Q5T1V6 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.63e-12■□□□□ 8
DDX59Q5T1V6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.57□□□□□ -1.683e-12■□□□□ 8
Retrieved 89 of 7,289 protein–RNA pairs in 601.5 ms