Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 AL035685.1-201ENST00000636663 812 ntBASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 AL138781.2-201ENST00000617896 1843 ntBASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RCL1Q9Y2P8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 TSPY26P-201ENST00000476365 1326 ntBASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RCL1Q9Y2P8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 FZD10-202ENST00000539839 3282 ntBASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 AC131281.2-201ENST00000520478 145 ntBASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RCL1Q9Y2P8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms