Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP1S3Q96PC3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 BX842568.3-201ENST00000418104 571 ntBASIC14.96□□□□□ -0.01
AP1S3Q96PC3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.96□□□□□ -0.01
AP1S3Q96PC3 AC055733.4-201ENST00000638462 1354 ntBASIC14.96□□□□□ -0.02
AP1S3Q96PC3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP1S3Q96PC3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP1S3Q96PC3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
AP1S3Q96PC3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AP1S3Q96PC3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP1S3Q96PC3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 AC011484.1-201ENST00000377652 1995 ntBASIC14.95□□□□□ -0.02
AP1S3Q96PC3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP1S3Q96PC3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 AL512408.1-201ENST00000569378 2000 ntBASIC14.94□□□□□ -0.02
AP1S3Q96PC3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 BX005040.4-201ENST00000637145 1518 ntBASIC14.94□□□□□ -0.02
AP1S3Q96PC3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.94□□□□□ -0.02
AP1S3Q96PC3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AL162377.1-201ENST00000618844 1793 ntBASIC14.93□□□□□ -0.02
AP1S3Q96PC3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms